KEGG   Notothenia coriiceps (black rockcod): 104941946
Entry
104941946         CDS       T04920                                 
Symbol
pabpn1
Name
(RefSeq) polyadenylate-binding protein 2
  KO
K14396  polyadenylate-binding protein 2
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104941946 (pabpn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncc03019]
    104941946 (pabpn1)
Messenger RNA biogenesis [BR:ncc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104941946 (pabpn1)
SSDB
Motif
Pfam: RRM_1 RRM_occluded
Other DBs
NCBI-GeneID: 104941946
NCBI-ProteinID: XP_010765417
UniProt: A0A6I9MLS3
LinkDB
Position
Unknown
AA seq 245 aa
MAEFGNGLAEESLLDSDPGHPELEDPGVGDEEPGLEEGEASIEDPELEAIKARVREMEEE
AEKLKELQNEVEKQMNLSPPPVGPVIMSIEEKMEADGRSIYVGNVDYGATAEELEAHFHG
CGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTAMALDESLFRGRQIKVGAKRTNRPGI
STTDRGFPRARFRSRGGGGGGGGGGGGGGGSFSSRARYYSGYTPPRGRGRAFRGRGRTTS
WYSPY
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcggagttcggtaacggactggcggaggaatctctactagattcagaccccggacat
cccgagctggaagacccgggagtcggtgatgaagaaccggggttagaagagggggaggcc
tcgattgaagacccggagctggaggcaatcaaagcccgggtgagagagatggaggaagag
gcagagaagctgaaggagctccagaacgaggtggagaaacagatgaatctcagcccccca
ccagtcggccctgtcatcatgtccatcgaggaaaagatggaagcagatggcagatctatt
tacgtcggaaacgtggactatggtgccacggcagaagagctcgaggctcactttcatggc
tgcggttcagtaaacagagtcaccatcctatgtgacaaatacacagggcatcccaaaggg
tttgcctatattgagttttcagacaaagagtctgttaggacagccatggctttggacgag
tccctttttagaggaaggcagataaaggtgggcgctaagagaacaaacagacccggcatc
agcaccacagaccgcggctttccacgggctcggttccggtcacgtggaggcggcggtggc
ggaggaggaggtggaggcggcggaggaggaagcttctcgtcgagggcgcgctattacagt
ggatacacaccacccagaggcagaggccgggccttcaggggccgagggcgaacaacatcg
tggtattccccttactaa

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