Notothenia coriiceps (black rockcod): 104943390
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Entry
104943390 CDS
T04920
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1 isoform X1
KO
K06063
SNW domain-containing protein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03040
Spliceosome
ncc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104943390 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104943390 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncc03041
]
104943390 (snw1)
Spliceosome [BR:
ncc03041
]
Complex B
Other components
Prp19-related factors
104943390 (snw1)
Complex C
104943390 (snw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
104943390
NCBI-ProteinID:
XP_010767075
UniProt:
A0A6I9MZJ6
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MSLASFLPAPTQLSQDQLEAEEKLRAQKCYSTALVSSRREPPPYGQRKGLVPRSLEDFGD
GGSFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYDAIARAGQGKDKVIFSKYTDLL
PKEVLHEDTPELQKPDEEAVKELTEKTRMALDKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKSHGDKAGGEDSEVRERDEIRH
DRRKERQHDRNISRAAPDKRCWTHTLNTPPSSISQYTHTHTHTCLTAESFIGPAVIPNKR
SQIQQSTLTVVHV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtctctagcgagctttttaccggcgccgacccagctgtctcaggaccagttagaggca
gaggagaagcttcgggcccagaagtgctactccacagccctggtctcgtcccgcagagag
ccccctccttatggacaaagaaaaggcttggtgcctcgttcacttgaggactttggagat
ggaggatctttcccagagatccacgtggcccagtttcctctggagatgggtcggaagaag
aagacatccaacgccctcgcggtgcaggtggatgcagaaggaaagatcaaatatgacgcc
atcgcgagagcaggacagggcaaggataaggttatcttcagtaagtacacagaccttctt
ccaaaggaagttctgcatgaggatactccagaactgcagaagcctgatgaggaggctgta
aaagagctgacggagaagacccgcatggccctggataagcaggtgtctcaaaagatcgct
gctgccatgcctgtaagagctgcagacaaacaggcccctgcacagtacatcagatacacc
ccatcccagcagggagtggctttcaactcaggggccaaacagagggtgatccgcatggtg
gagatgcagaaagatccaatggaacctccacgtttcaagatcaacaagaagattcccaga
ggacctccttccccccctgcccctgtcatgcactccccaagcagaaagatgacagtcaag
gagcagcaggagtggaagattcctccatgtatctccaactggaaaaacgctaagggctac
accattcctcttgacaaacgtctggcggctgatggcagggggctgcagacggttcatatc
aacgaaaactttgctaagctggctgaggcgctctacatcgccgacagaaaggccagagaa
gcagtggagatgagagcccaggtggagaagaagatggcccagaaggagaaggaaaagaag
gaggagaaactcagggaactggcccaaatggctcgagaccgcagggcggggatcaaaagt
cacggggacaaagcaggtggcgaggacagcgaggtcagggagcgtgacgagatccgccac
gacagaaggaaagagagacagcacgacaggaacatttccagggccgctcctgataagagg
tgctggacacacactttaaacacacccccctcctccatctctcagtacacacacacacac
acacacacttgtctcactgctgaatcattcatcggcccagccgttataccgaacaaacgc
agccagatccaacagagcactctgacagtagtccatgtttga
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