KEGG   Notothenia coriiceps (black rockcod): 104944475
Entry
104944475         CDS       T04920                                 
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
  KO
K12869  crooked neck
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104944475 (crnkl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ncc03041]
    104944475 (crnkl1)
   03036 Chromosome and associated proteins [BR:ncc03036]
    104944475 (crnkl1)
Spliceosome [BR:ncc03041]
 Complex B
  Other components
   Prp19-related factors
    104944475 (crnkl1)
 Complex C
    104944475 (crnkl1)
Chromosome and associated proteins [BR:ncc03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     104944475 (crnkl1)
SSDB
Motif
Pfam: HAT HAT_PRP39_C HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_Syf1_CNRKL1_C TPR_14 Suf TPR_CcmH_CycH TPR_19 U3_assoc_6 TPR_12
Other DBs
NCBI-GeneID: 104944475
NCBI-ProteinID: XP_010768313
UniProt: A0A6I9MYI1
LinkDB
Position
Unknown
AA seq 269 aa
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLRKRKGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNITLWLKY
AEMEMKSRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNVAGCRQAFERWMEWEPD
EQAWHSFINFELRYKEVDKGRSIYERFVLVHPEVKNWIKYARFEEKHGYIAHSRKVYERS
VDFFGEDYVNEHLFVAFAKFEEAQKEVSD
NT seq 810 nt   +upstreamnt  +downstreamnt
atggcttcaaccgcggcaggcaagcagcggatcccgaaggtggcgaaggtgaagaacaaa
gctccagcagaggttcagatcacagctgagcagctgctgagggaagccaaagagagagag
ctcgaacttctgccaccgccacccaaacagaagatcactgatgaagaggagctgaacgat
tacaaactgaggaagaggaaggggtttgaggacaacatcagaaagaaccgaacggtcatc
agtaactggatcaaatacgcacaatgggaggaaagcctgaaggaggtccagagggctcgt
tccatctacgagcgagcgctggacgtggatcacagaaacatcacgctgtggctgaaatac
gccgagatggagatgaagagccgacaggtgaaccacgcccgaaacatctgggaccgagcc
atcaccatcctcccccgcgtcaaccagttctggtacaagtacacgtacatggaggagatg
ctggggaacgtggcgggctgcaggcaggcgttcgagcgctggatggagtgggagcccgac
gagcaggcctggcactccttcatcaacttcgagctgcgctacaaggaagtggacaaaggc
cgcagtatttacgagagattcgtcctcgttcaccccgaggtgaagaactggataaagtac
gctcgttttgaggagaagcacggctacatcgctcacagcaggaaggtgtacgagcggtcg
gtggacttcttcggggaggactacgtgaacgaacacctgtttgtggccttcgcaaagttc
gaggaggcgcagaaagaggtgagcgactga

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