Notothenia coriiceps (black rockcod): 104947642
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Entry
104947642 CDS
T04920
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104947642
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104947642
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
104947642
NCBI-ProteinID:
XP_010771994
UniProt:
A0A6I9N243
LinkDB
All DBs
Position
Unknown
AA seq
1948 aa
AA seq
DB search
MAAPLIAPPGPDSFKKFTLESLAIIELRINEEKNRKPPKQDSSYRDDDDENKPRPNTDLE
AGRSLPYIYGDIPKGMVAVPLEDLDPYYLNSQKTFIVLNSGKTIFRFSATSALYFINPLN
PFRRVAIKILIHSLFSMIIMFTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKICA
RGFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVFWPINMTKSFDWTDYIL
NDTNYYFLPGQLDALLCGNSSDSGRCPEGFTCLKAGRNPNYGYTSFDSFGWAFLALFRLM
TQDFWENLYMLTLRAAGKTYMLFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATMEEAIR
KEEEFKAMLDQLKRHQEDVQMAAMATSAGTVSEDAVEDDGGGRLSCSSSEMSKLSSKSAK
ERRNRKKKWRQKEQDKEKGDSEKFVKSESDDGSKRSRFRFPDNRLGRKSSIMNQSLLSIP
GSPFLSRHNSKSSIFSFKGRGKDVGSENEFADDEHSTVEECEERRGSLFSPYRRNSYSGF
HGKRNSTVDCNGVVSLIGRGPGGRLLPEPTTEVEVKKKMSGSLMVSVDQLNTSFGRKERA
NSVMSVITNTLVEELEESQRKCPPCWYKFSNTFLIWECSPNWIKTKEIMNLIVMDPFVDL
AITICIVLNTLFMAMEHYPMTPDFEHMLSVGNLVFTGIFAGEMLFKLMAMDPYYYFQEAW
NCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGN
LTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISIECELPRWHMNDFFHSFLIVFRVLCGEW
IETMWDCMEVAGQGMCLLVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEPNNL
QISVKRIKIGIAWFKAKMGIVVASLLKKPRMEDEQKPLDDMYNKKLNCIANHSGVDINRD
LDYAKNGNGTTSGIGSSVGKYMIDDDHMSFIHNPNLTVCVPIAVGESDFENLNTEDFSSE
SENENSKEMDDTSSSEGSTIDIKPDVVEEVVVETVEEYLDPDACWTDGCLAKFKCCEVDI
STGWWKKWWYLRKTCYLIVEHNWFETVIIFMILLSSGALAFEDVYIEQRKTIRIILEYAD
RVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLVANALGYSDLGPIKSLR
TLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYC
WNLTAEEYFPVDVVNNKTQCEALISQNSSEVRWRNVKINFDNVGAGYLALLQVATFKGWM
DIMYAAVDSRNVEDQPSYEVNIYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKFGG
QDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNPVQGMVFDFVTQQVFDISIMILICLNM
VTMMVETDDQSDETENVLYWVNFIFIFVFTTEFLLKLFALRHYYFTNGWNIFDVVVVILS
IVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKSAKGIRTLLFALMMSLPALFNIGL
LLFLVMFIFSIFGMSNFGYVRHGAGVDDLYNFETFGNSMIILFMITTSAGWDGLLLPILN
YPPDCDPLLENPGTSVKGDCGNPSVGIFFFVMYIIISFLIVVNMYIAIILENFSVATEES
ADPLSEDDFETFYEIWEKFDPTASQFITFAKLADFADTLEHPLRVPKPNAIELIAMDLPM
VSGDRIHCLDILFAFTKRVLGDSGELDMLRQQMEERFVAANPSKVSYEPITTTLRRKQED
VSARIIQNAYRIHLIRRGIIFKRRTFSNNKYENGGTNQEKKESTPSTASLPSYDSVTKPD
KEKQDENKEEWARKEKDKNQKDEWESKC
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttattgcaccgccaggacctgatagcttcaagaagtttactttggaa
tctttggcgattattgagctgcgcatcaatgaggagaaaaacaggaagcctcccaagcag
gacagcagctaccgcgacgatgatgacgagaacaagcccagacccaacactgacctggag
gctgggcggagcctgccctacatctacggggacatacctaagggaatggtggcggtacca
ctggaggacctggacccatactacctgaattctcagaaaacatttatagtactaaattca
gggaagacaatcttccgttttagtgccacatctgccttgtacttcataaatcctttaaac
ccgtttaggcgagtagctattaaaattttgatacattctcttttcagcatgatcattatg
tttactattttgaccaactgtatattcatgacctttagtgatcctcccgagtggtcaaaa
caagtagagtacacattcacaggaatttatacatttgagtctcttgtaaaaatctgcgca
cgtggattctgtatagacgggtttacattcctcagagacccatggaactggttggatttc
atggtcatttcgatggcatatataacagagtttgtggacctgggcaatgtatctgcgctg
agaacattcagagttctccgagcattgaaaactatctcagtcattccaggcctgaagacc
attgtgggcgccctgatccagtctgtgaagaagctttcggatgtgatgatcctgaccgtc
ttctgcctgagcgtctttgccctcatcggtctccagctcttcatgggaaacctgcgccac
aagtgtgtgttctggccaatcaacatgaccaagagcttcgattggacggattacatcctg
aatgataccaactactacttcctgcctggccagttggacgctcttctctgtgggaacagc
tccgactctggccgctgcccggagggcttcacatgcttgaaagctgggaggaatccaaac
tacggctacaccagctttgacagcttcggctgggccttcctggctctcttccgcctcatg
acacaggacttctgggaaaacctttacatgctgacgctgagggcggcagggaagacctac
atgctcttctttgtgctggtgatctttgtgggctcgttctacttggtgaatctgatcttg
gctgtggtggccatggcttacgaggagcagaaccaggccaccatggaagaggctattcgg
aaggaggaggaattcaaggccatgctggatcagctcaagagacatcaggaagacgtccag
atggctgccatggcaacctctgcggggacagtgtcagaggacgcggtagaggacgatgga
ggagggcgtctgtcatgcagttcctctgagatgtcaaagctcagctccaagagtgcaaaa
gagcggcgcaatcgtaagaagaagtggcggcagaaagagcaggacaaggagaaaggcgac
agcgagaagtttgtcaagtcagagtcggatgacggcagcaagaggagccgattccggttc
cctgataatcgcctcggtcgaaagtcttccattatgaaccagtccctcctcagtataccc
ggctcgcctttcctgtcccgccacaacagcaagagcagcatcttcagcttcaagggccgt
ggtaaggatgtgggctcagagaacgagtttgcagacgacgagcacagcacggtggaggag
tgtgaggagcgccggggctcgctgttcagcccctatcgacggaacagctacagcggcttc
cacgggaagaggaacagcacggtggactgcaacggcgttgtgtcgctcatcggccgtggg
cccggtggacgccttctgcctgagccgaccactgaggttgaggtgaagaagaaaatgtcg
ggctccctgatggtgtctgtggaccagctcaatacctcctttgggcggaaagagcgggcc
aacagtgtcatgagcgtcattaccaacacactagtggaggaactggaggagtctcagcgc
aagtgtccgccatgctggtataagttttctaacacattcctgatctgggagtgctccccc
aactggattaagaccaaggagattatgaacttgattgtcatggaccccttcgtggattta
gccatcaccatctgtatcgtcctcaacaccctcttcatggccatggagcactaccccatg
acccccgactttgaacacatgctgtctgtaggcaatctggtgttcacagggatctttgca
ggagagatgctttttaagctgatggctatggatccgtattactacttccaggaggcctgg
aactgctttgacggtttcattgtgacgctgagtttagtggagctggctctggccgacgtg
gaaggcttgtctgtgctgcggtcattccgattgctgagagtgtttaagctggccaagtca
tggcccaccctcaacatgctgattaagatcattggtaactcggtgggagccttgggaaac
ttgactctggtgctggccatcatcgtcttcatctttgccgtggtgggtatgcagctgttt
ggcaagagctacaaagactgtgtgtgtaagatctctattgaatgcgagttgccccgctgg
cacatgaacgacttcttccactccttcctgattgtcttccgggtgctgtgcggtgaatgg
attgagaccatgtgggactgcatggaggtcgcgggtcagggcatgtgtctcctcgtcttc
atgatggtcatggtcatcggtaacctggtggtgttgaacctgtttcttgccttgctgctg
agctctttcagcgctgacaacttggctgcaacagatgacgacggtgagcccaacaacttg
cagatttctgtaaagcgtatcaagataggcattgcatggtttaaagcaaagatgggcata
gtggtggccagtctgctgaagaaaccacggatggaggacgagcagaagcctttggacgac
atgtacaacaagaagctgaactgcattgctaaccacagcggggtggacatcaaccgtgac
ctggactacgccaagaatggtaacggcacaaccagcggtataggcagcagcgttgggaag
tacatgatcgatgacgaccacatgtcattcatccacaacccgaacctgaccgtctgcgtg
cccatcgctgtgggagagtctgactttgagaacctgaacacagaggacttcagcagcgag
tcggagaatgagaacagcaaagagatggatgacaccagttcttcggagggcagcaccatc
gacatcaagccagatgtggtggaagaggtggtggtggaaactgtggaggaatacttggat
ccagatgcatgttggacagatggttgtttggccaagtttaagtgctgtgaggttgacatt
tctacgggctggtggaaaaagtggtggtacctgagaaaaacctgctacctgatagtggag
cacaactggtttgagaccgtcatcatcttcatgatcctcctcagtagcggtgccctggct
tttgaagatgtgtacatcgagcagaggaagaccattcggatcattttggagtacgctgac
agggttttcacctacatcttcatcctggagatgttgttgaaatgggtcgcctatggtttt
gtcaagtatttcaccaatgcttggtgttggctagacttcttcattgtggatgtgtctata
gtcagccttgtagctaatgcgctgggctactccgatctagggcccattaaatcactcagg
acactaagggccttgagacccctcagagccttgtcacgttttgaagggatgagggtggta
gtcaacgccttggtgggtgccatcccttccattatgaatgtgttgctggtttgcctcatc
ttttggctgattttcagtatcatgggggtcaacttgtttgcgggcaagtactactactgt
tggaatcttacagctgaggagtactttcccgtcgacgtggtcaacaacaagacccagtgt
gaggccctcattagtcaaaactcttccgaggtcaggtggaggaacgtcaagatcaacttt
gacaatgtgggtgccggatacctcgccctgctgcaagtggccacattcaaaggttggatg
gacattatgtacgcggctgtggattcgagaaatgtggaagaccagcccagctatgaagtc
aacatctacatgtacatctacttcgtcgttttcatcatttttggctccttcttcaccctg
aacctcttcattggtgtgatcattgacaacttcaaccagcagaagaaaaagtttggaggc
caggatatattcatgacagaagaacagaaaaaatattacaatgccatgaaaaaacttggg
tccaaaaagccacagaaacctattcctcgaccacagaacccggtccaaggcatggtgttt
gactttgtgacacagcaagtctttgacatctccatcatgatcctcatctgcctcaacatg
gtcaccatgatggtggaaactgacgatcagtccgatgaaacagagaatgtcctctactgg
gtcaacttcatctttattttcgtcttcaccacggagttcctgctaaagctgtttgccctt
cgccactattacttcaccaatggctggaatatcttcgacgtggtggttgtcatcctgtct
attgttggtatgttcctggctgatatcattgagaagtattttgtgtcaccgaccctgttc
agggtgatcaggttggcccgtatcggccgtatcctccgtctgatcaaaagtgctaagggt
attcggactttgctgtttgctctgatgatgtcactgccggcactgttcaacattggccta
ctgctttttctggtcatgttcatcttctccatcttcggaatgtccaactttggctacgta
agacacggagcgggagttgatgacttgtacaactttgagacttttggcaacagtatgatc
attctgttcatgatcaccacgtcagctggatgggacggactgctgctgccgatcctcaac
tacccaccagactgtgatccacttttggagaaccctggtacatccgttaagggcgactgt
ggaaacccctcagtgggaatcttcttttttgtaatgtatatcatcatttctttcctgatt
gtggtcaacatgtacattgccatcatcctggagaacttcagcgtagccacagaggaaagt
gctgatccgctcagtgaagacgactttgagaccttctacgagatctgggagaagtttgac
cccactgcctcgcaatttattacttttgccaagctggctgactttgccgacacacttgag
cacccacttcgtgtgccaaagcccaacgctatagagctaattgccatggacctgcccatg
gtgagtggcgatcgcattcactgcctggacatcctgtttgccttcacaaagcgagtgctg
ggtgacagtggagagttggacatgctgaggcaacagatggaggagcgttttgtggcagcc
aacccctcgaaggtgtcgtatgaacccatcaccaccacgcttcgccgcaaacaggaggat
gtctctgccagaattatccagaatgcctaccgcatccacctcatccggcgaggtatcatc
ttcaagcgccgtactttttctaacaataagtatgagaatggagggaccaaccaagagaag
aaggagagcacaccatctactgcctctctgccttcctacgacagcgtgaccaaacctgac
aaggagaagcaggacgaaaacaaggaggagtgggccagaaaagagaaggacaaaaaccaa
aaagatgagtgggaatctaagtgttag
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integrated database retrieval system
