Notothenia coriiceps (black rockcod): 104949146
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Entry
104949146 CDS
T04920
Symbol
itgb3
Name
(RefSeq) integrin beta-3
KO
K06493
integrin beta 3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03266
Virion - Herpesvirus
ncc04081
Hormone signaling
ncc04145
Phagosome
ncc04148
Efferocytosis
ncc04510
Focal adhesion
ncc04512
ECM-receptor interaction
ncc04517
IgSF CAM signaling
ncc04810
Regulation of actin cytoskeleton
ncc04820
Cytoskeleton in muscle cells
ncc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
104949146 (itgb3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
104949146 (itgb3)
04512 ECM-receptor interaction
104949146 (itgb3)
04517 IgSF CAM signaling
104949146 (itgb3)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104949146 (itgb3)
04148 Efferocytosis
104949146 (itgb3)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104949146 (itgb3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104949146 (itgb3)
04810 Regulation of actin cytoskeleton
104949146 (itgb3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104949146 (itgb3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104949146 (itgb3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncc04147
]
104949146 (itgb3)
04515 Cell adhesion molecules [BR:
ncc04515
]
104949146 (itgb3)
04090 CD molecules [BR:
ncc04090
]
104949146 (itgb3)
Membrane trafficking [BR:
ncc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
104949146 (itgb3)
Exosome [BR:
ncc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104949146 (itgb3)
Cell adhesion molecules [BR:
ncc04515
]
Integrins
Integrin beta subunits
104949146 (itgb3)
CD molecules [BR:
ncc04090
]
Proteins
104949146 (itgb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
I-EGF_1
PSI_integrin
EGF_2
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
104949146
NCBI-ProteinID:
XP_010773736
UniProt:
A0A6I9NGR9
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MGAFSDSLLILFLSLLSASNVFGSNICTSQGVTTCQHCLAVHPTCAWCSQEEYGKGGSGA
SRCDLKANLLKGGCRISDLEFPSSTLNIQKDTPLSDKASGTADDVTQIRPQKIHIALRPG
DSQHFSVSVKQVEDYPLDLYYLMDLSYSMKNDLVRLRDLGNELAVTMGRTTSNLRMGFGA
FVDKTIFPYMYTHPPEALANPCFGQATCVAQFGFKHVLSLTEKVARFTEEVKKQQVSKNR
DAPEGGFDAIMQAVVCKERIGWRPDASHLLVFTTDDVTHIALDGRIAGIVQPNDGLCHLD
QDNVYNKTAVLDYPSLAQMTEKMSQNNIKLVFAVTSTVVPLYKEYSNLIPGSTVGLLSED
SGNVIQLISDAYARISSNVELELVGVPDELNLSFNATCLNGEVILGLKSCSGLKIGDTVS
FNVEAQLRGCPMEKSRTFTIKPRGFKDSLEVTVDFSCGCDCEAKALADSSLCSDGNGTYE
CGVCQCHKGRLGPTCQCSVEDYSPSDDANCNPKPGSPICSGRGDCLCGQCSCHDNEFGQV
WGKFCECDDFNCLRFKGALCSDHGKCGCGICQCDAGWKGDNCNCSTQIDTCMSRIGMLCS
GRGYCECGVCQCTQPGAYGDTCEKCPTCPDSCTLKEKCVECQHFERGQYTEDNSCSRICK
DEIKVVEELVFHESNAAAVNCSYKDEDDCVVHFQYYEDETGKSILFVIKEPECPQGPDIL
VVLMAVAGAILLLGIVGLLIWKLLVTIHDRGEYAKFEEERSKAKWDTANNPLYKGATSTF
TNVAYRGT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgggagctttttcagacagtctcctgatactgtttctctctttgttatcggcatcaaac
gttttcggttccaacatctgcacctcacaaggagtcaccacatgtcaacattgcttggct
gttcatcctacgtgtgcctggtgctctcaggaggaatatggcaagggaggatccggtgca
tcccgctgcgacctgaaggccaatctgctgaaagggggctgcagaatttctgatctggag
tttccctccagcaccctgaatattcagaaggacacaccgctcagcgacaaggcctctggc
actgctgatgatgtcacacagataaggcctcagaaaatccatattgcactaagaccagga
gactcccagcatttttcagtgtcagtgaaacaggtagaggattacccactggacctctac
tatctgatggatctttcgtattcaatgaagaatgacttggttcgccttcgcgacttgggc
aatgagcttgccgtgaccatgggccgcaccaccagcaacctgcgcatggggtttggagcc
tttgtggacaagaccatcttcccttacatgtacacccatcctccagaggcattggcaaac
ccttgctttgggcaagccacttgtgtggctcaatttgggttcaagcatgtgctgtcactg
acagagaaggtggctcgcttcactgaggaggttaagaaacagcaggtgtctaaaaataga
gacgctccggagggtggatttgatgccatcatgcaggctgtggtgtgcaaggaaaggatt
ggctggcgcccagatgcctcgcaccttttggtgttcaccactgatgacgttactcacatc
gctctggatggacgtatagcaggaattgtccagcccaatgatggcctatgccaccttgat
caggacaatgtttacaacaaaactgctgtgctggactatccctccttggcacagatgaca
gagaaaatgtctcaaaacaacattaaattagtttttgccgtgaccagcacagtggtgcca
ctttataaggagtacagtaaccttattccaggctcaactgtgggattgctgtcggaggac
tctgggaatgttattcagctcatttcagatgcttatgcgagaattagctctaacgtggaa
ctggagttagtgggagttccagatgagttgaatctgtccttcaatgccacttgtctaaat
ggagaggtcatccttggactcaagtcctgctccggcctcaaaattggagacacagtgtca
ttcaatgtggaggctcagttacgtggctgcccgatggagaagagccgcacttttactatc
aaacctcgaggctttaaggattccctggaggtaaccgttgacttttcctgtggctgcgac
tgtgaggcgaaggccctagccgacagctccctctgtagcgacggcaacgggacctacgag
tgtggcgtgtgtcagtgtcacaagggccgtctgggcccaacctgccagtgctcagtggag
gactacagtccgtctgatgatgccaactgcaacccaaagcctgggagcccaatctgcagc
gggagaggcgactgtttgtgtggacagtgctcctgccatgacaatgagttcggccaggtg
tggggcaaattctgcgaatgtgacgactttaactgcctgcgcttcaaaggggcactgtgc
tccgatcatgggaagtgtggctgtggcatctgtcagtgtgacgctggatggaaaggagat
aactgtaactgctccacacaaatagacacctgcatgtccaggattggcatgctgtgcagt
ggccggggttactgtgagtgtggggtttgtcaatgcactcagccaggcgcctacggagac
acctgtgaaaagtgccccacctgtcctgattcctgtactttaaaagagaagtgtgttgag
tgtcagcacttcgagagaggacagtacactgaagacaacagctgcagtagaatctgcaaa
gatgaaattaaagtagtggaagaactggttttccatgagagcaatgcagcagcagtgaat
tgctcgtacaaagatgaagacgactgtgttgtgcacttccagtattacgaagatgaaact
ggcaaatccattctgtttgtgataaaagaaccagagtgtcctcagggtccagacatcttg
gtggtgctcatggcggtggccggagctattttgctactgggcatcgtgggtctgctcatc
tggaagctgctggtcaccattcacgaccgcggagagtatgctaagtttgaggaagaaaga
tccaaagccaaatgggatacggctaacaatcccttgtacaaaggagccacatcgaccttc
accaatgtagcgtaccgaggcacttaa
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integrated database retrieval system
