Notothenia coriiceps (black rockcod): 104950572
Help
Entry
104950572 CDS
T04920
Symbol
trpc4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104950572 (trpc4)
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104950572 (trpc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
104950572
NCBI-ProteinID:
XP_010775409
UniProt:
A0A6I9NCF0
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MSQLYYRRTDSSSYRDRIPLRIVRAESELSPLEKAYLGAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFSVYVGDALLHAIRKEVVGAVELLLNHKK
PGGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFRLSWELEELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMILNYRDDINLLEDEGNNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRQWAGKCITCVFIGLLYPVFAVCYLIAPKSRHGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIVTTEQDRQDRQGPAPTTVEWMILPWVLGFIWAE
IKQMWDGGFQDYVHDWWNLMDFVMNSLYLATISLKIVAYTKYSGSKPRNQWEMWHPTLVA
EAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETKASDERGKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLINLYVTNVDADHQFTE
FVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGATLP
APFNIIPSPKLFLYFLCWIKRHVCKITGSKRSEIFGSLGRRAAENLRINTQYQEVVRNLV
KRYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVMGMMKTGKPALQGAKASGSSAESS
LAYPNSSLKVSPVPQSSQGKSKPNRFKIIASILKQSCSSASPRPPEVFNGLPNGLVVSEE
SSSKKSSHKRNPPKDDIDFGLLETRHWGSSEATSGAGEISREMYSLSEEAGGPEVSDAEQ
RDREQKEIGERGLLLTEREEESAVNEAKEENSEVINTNSSSDEGGKI
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtactaccggcggactgacagctcctcttaccgggaccgcatcccgctg
agaatagtgcgggccgagtcggagttgtcgcctctggagaaagcctacctcggagctgtg
gagaagggggactacgctagtgtcaaacaggctctggaggaggcagagatctacttcaag
atcaacatcaattgcatcgatcctctcggccgaacggctctactgattgccattgagaac
gagaacctggaaatcattgaactcttgctgagcttcagcgtctacgtcggagatgctttg
ctacacgcaatccgcaaggaagtggtgggagctgtggagctgctgcttaatcacaagaag
cccggcggaggcatgcaagtgcctcctatcttgttggataagcagttctctgacttcacc
cctgacatcactcccatcatcctcgctgcacacaccaacaactatgaaattattaagctt
ttggtgcagaaaggcgtgtcaatgccgcagccacatgaggtgcgctgtaactgtgtggag
tgtgtgtctagttcagacgtggacagcctgcggcactcgcgctcccgcctcaacatctac
aaagcgctgtcaagcccctcgctaattgcgctctcgagcgaggaccccttcctcactgcg
ttcaggctcagctgggagctagaggagctcagcaaggtggagaacgagttcaaatcagag
tatgaggagctgtcacagcagtgtaaacagtttgccaaagatctcctggaccagacaaga
agctccagagagctggagatgatcctcaactacagagacgacatcaacttattggaggat
gagggcaacaacgacctggcaagactcaaactcgctatcaaataccaccaaaaagagttt
gtagcgcagccaaactgccagcagctcttggcgtcccggtggtacgacgagttccccggc
tggaggcggcgccagtgggcagggaagtgcatcacctgtgtgttcatcggcctcctctac
cctgtgtttgctgtctgctacctcatcgctcccaagagtcgccacggcctcttcatccgc
aagcccttcatcaagttcatctgccacacggcctcctacctgaccttcctgttcctgctg
ctcctcgcctcccagcacatcgtcaccaccgagcaggaccggcaggacaggcagggtccg
gctccgaccaccgtggagtggatgatcctgccctgggtgctgggattcatctgggcagag
atcaaacaaatgtgggatggcggtttccaagactacgtccatgactggtggaacctgatg
gactttgtcatgaactctctatacctggccaccatttctcttaagattgtagcctacact
aagtacagtgggagtaaacccaggaaccagtgggagatgtggcacccaacactagtggct
gaggcagtgtttgccatagccaacattttcagttccctgcgcctcatctcgctcttcact
gccaactctcacctggggccgctgcagatctctctggggagaatgctgctggacatcctg
aagttcctcttcatctactgtctggtcctactcgcttttgctaacgggctgaaccagctg
tacttttactatgagacaaaggcttcagatgagagggggaaatgcaaaggcatccgctgt
gtggagcagaataacgctttctccacgttatttgagaccctgcagtctctcttctggtcc
atcttcggtctgatcaacctgtatgtgaccaacgtggatgcagaccatcagttcacagag
tttgtcggggccacaatgttcggcacttacaacatcatctcactggtggtgctcctcaac
atgctgatagccatgatgaacaactcctaccagcacattgcagaccatgcagacattgag
tggaagtttgctaggacaaagctgtggatgagttactttgaagaaggggccacactgccg
gcccctttcaacatcatccccagccccaaattattcttgtactttttatgctggatcaaa
aggcatgtgtgcaagataacaggatccaagcgcagtgaaatctttggaagtctcggaaga
cgagcagcagagaacctgaggataaacactcagtaccaggaagtagtgaggaacttggtg
aaacgttatgtggccgccatgattagagacgccaagacagaagaaggcctgactgaagag
aacttcaaggagctgaaacaagacatctccagttttcgatatgaggtgatgggcatgatg
aagacagggaagcctgctcttcagggggcaaaggccagtggcagctcagcggagtccagc
cttgcttaccccaactcgtcgctcaaggtttctcccgtcccccagagcagccaggggaaa
agcaaacccaacagattcaagatcatcgcatccatcctgaagcagagctgttcttcagct
tcaccgagaccgcccgaggtcttcaacgggctgcctaacggactggtggtctccgaggag
agctcaagtaaaaagtcaagccacaagagaaatccccccaaagatgacattgactttggc
ttgttagagacacgccactggggcagcagcgaagccacatcgggggcaggagagatttcc
agagagatgtactctttgtcagaagaagcgggggggccggaggtctctgacgcagagcag
cgagacagagagcaaaaggagataggtgagagaggactcctgctgacggagagggaggag
gaaagtgcagtgaacgaggccaaggaggaaaacagtgaggtcatcaacaccaacagcagc
tccgatgaaggggggaaaatatga
DBGET
integrated database retrieval system
