Notothenia coriiceps (black rockcod): 104953701
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Entry
104953701 CDS
T04920
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
104953701
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104953701
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104953701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
104953701
NCBI-ProteinID:
XP_010778979
UniProt:
A0A6I9NMW6
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MPKKQQQQQKQKQDKNQHDVELNRLVRPSPLSPAHLRSRSPSPSSLNGSTLELPNVPSYP
RLPPIVSSPSKQLNSASCQLSGLSNPAFFIEDDSDIPAIRAAESSSLSLRPAVNVEDVDS
DHERGGERGAGGGGEGQSHVPQILGPQDPKITTLTVPVTPSGCRQSKGDKDSGRNRIWTK
IRTLHSQSEDDDEEGSTHVRAWPSQSSLHSSEDIMRERPASSASQTSTVVNERLQELVRM
FKDRTEKAKEKLIDLDSSDEDSIVPSPPQTSTAQPEAQPVVGGEKEEEAGPSGGRGGGGV
ESGVEEQQSGRCCKVKAPRWILACVHYRFPASIDPFTNLMYVLWMFLVSFAWNWNAWFIP
VRWAFPYQTPDNIYYWLLTDYLCDLIYILDMTIFQPRLQFVRGGDIVCDKKEMRKNYMKT
KRFKFDLASLVPLEIFYFKTGINPLLRLPRLLKINSFFEFNERLEAILTKAYIYRVIRTT
TYLLYCLHCNACLYYWGSAYTGLGSTQWVYNGKGNSYIRCYYFAVKTLITIGGLPDPTTL
FEIVFQLINYFVGVFAFSIMIGQMRDVVGAATSGQTYYRTCMDNTIKYMSSYRIPKDVQN
RVKTWYNYTWQSQGMLDEQELLTQLPDKMRLDIAIDVNYSIVSKVALFQGCDRQMIFDML
KSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGRTVFVTLRAGSVFGEISLLA
VGGGNRRTANVIAHGFANLFILDKKDLNEILVHYPESKKLLRKKARKMLTKGKKPEPKEE
PKGPPQAPAAPVRPETPKLLRAALEMAERSTGLKGALAKVKEKTNKSSVSLQPSVCSSLP
PPSPSCSSGPDRDEDTPSPLSTSSATFRSASRCCNNNNNNNSAMPHSASQCHGDSEEMLT
MDQGEESVSETEGNEGRKRKEKKL
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaaacaacaacaacagcaaaaacagaagcaagacaagaatcagcatgacgtg
gaactgaaccggctcgtccggccctcccctctctctcctgctcatctccggtcccgctcc
ccgtctccatcctccctcaacggcagcaccctcgagttgcccaatgtgccatcctacccg
cgcctgccgccaatcgtcagctccccctcaaagcagctcaactcagcgtcctgccagctc
tcaggtctctctaacccggcgttcttcatagaagacgactcagacattccagcaataaga
gctgcagagagctctagcctcagccttcggccagctgtcaatgtagaagatgtcgactcc
gaccatgagagaggaggtgaaagaggagcaggaggaggtggggagggtcagagccatgtc
ccccaaatcctcggcccccaggaccccaaaatcacaaccctcactgtccctgtgacccct
tcaggatgtcgccaaagcaaaggagacaaagacagtgggaggaatcgtatatggactaag
attaggacccttcactctcaaagtgaagatgatgatgaagaaggaagcacccacgtcaga
gcctggcccagccagtccagcctgcacagctcagaagacataatgagagagcggccagca
tcgtcggccagtcagaccagtacggtggtgaatgagcgtctccaggagctggtccggatg
tttaaagacagaacggagaaggcgaaggagaaactcatagacctggacagctctgatgaa
gacagcatcgtcccctctcctcctcagacttcgactgctcagcctgaagctcagccagtg
gtcggaggagagaaggaggaagaggcaggcccctcaggaggaagaggaggaggaggagtg
gagagtggagtggaggagcagcagtctggccgctgctgcaaggtgaaagctcctcggtgg
atactcgcttgtgtgcactaccgcttccctgccagcatcgaccctttcaccaacttgatg
tacgtgctgtggatgtttttggtctcttttgcgtggaactggaacgcttggttcatcccg
gtgcgctgggccttcccctaccagacccccgacaacatttactactggctgctgaccgac
tacctgtgtgacctcatctacatcctggacatgaccatctttcagccgcgcctgcagttc
gtccgtggaggagacatagtgtgtgacaaaaaagagatgagaaagaattacatgaaaacc
aaacgcttcaagtttgacttagccagccttgttcccctggagatcttctattttaaaact
ggcatcaaccctctgcttcgtttaccccggctgctgaagataaactccttctttgagttc
aacgagcgtctagaggccatcttgaccaaagcctacatctacagggtgatccgcaccacc
acctaccttctctactgtctccactgtaatgcctgcctgtactactggggctctgcctac
acagggctgggctccacacagtgggtgtacaacggcaaaggcaacagttacattcgctgt
tactactttgctgtgaagaccctgatcaccattggtggtctgccggaccccaccaccctg
ttcgagattgtctttcaactcatcaactactttgttggagtctttgccttctcaataatg
attggacagatgcgtgatgtggtcggcgcagccacttcaggtcagacttactaccgcaca
tgtatggacaacaccattaaatacatgtcctcatatcgcatccccaaagacgtgcagaac
cgtgtcaaaacctggtacaactacacctggcaatcacaaggcatgctggatgagcaggag
ctgctgactcagctgccagataaaatgcgtctggacatcgctattgatgtcaactactcc
atcgtcagcaaagtcgctctttttcagggttgtgacagacagatgatctttgatatgctg
aaaagccttcgctcagttgtctacctgcctggggattatgtctgcaaaaagggggaggtg
ggtcgtgagatgtacatcataaaggcgggggaggtgcaggtggtcgggggaccggatgga
aggaccgtgtttgtcaccctcagagcgggatcagtcttcggggagatcagtttgcttgca
gtgggtgggggtaaccggcgcacagcaaatgttatcgctcatggatttgccaacctcttc
atcctggacaagaaagacctgaatgagatcctggtgcactacccagagtccaagaaactg
ctccgcaagaaggccaggaagatgcttaccaagggaaagaaacctgagcccaaagaagag
cctaaaggtccccctcaggccccggcagcccctgtaagaccggaaacccccaaactgctg
agagcagccctggagatggcagagagatccacaggacttaaaggagctctggctaaagtc
aaagagaagaccaacaagtccagtgtctcattacagccctccgtctgctcctccctgcct
cctccatctccctcctgcagctccggccctgacagagacgaggacacaccgtcacctctc
tccaccagctctgccacatttcgctctgcctcccgttgctgcaacaacaacaacaacaac
aactctgcgatgcctcactctgcgtcacagtgccacggcgattcggaggaaatgctcaca
atggaccaaggagaggagagtgtgagcgaaactgaagggaacgagggtaggaagaggaaa
gaaaaaaagttgtga
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