Notothenia coriiceps (black rockcod): 104954270
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Entry
104954270 CDS
T04920
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104954270 (smc4)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
104954270 (smc4)
Condensin II
104954270 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
APG6_N
AAA_15
TPR_MLP1_2
Crescentin
ABC_tran
Motif
Other DBs
NCBI-GeneID:
104954270
NCBI-ProteinID:
XP_010779652
UniProt:
A0A6I9NXZ5
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MPSKTAKSSTASSKSKGKGSQPRDDSEDELDVPPPQTKSNGQEEAPPTTDASLGEAAEAA
DNRSLEEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYSGEQILGPFHKRFSCIIG
PNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDQHKDVQSCTVEVHFQKIIDKEGD
DYEVIPNSKFYVSRTANKDSSSAYHIGDKKATFKEVGVLLRSHGIDLDHNRFLILQGEVE
QIAMMKPKGQTEHDEGMLEYLEDIIGSWRLKQPILTLARRIELLNEQRGEKLNRVKLVEK
EKNALEGEKNKAVEFLTLENNIFKHKSRLCQYYVDDLQKRAVDKDQEKQRIMEDTKELTE
KNAKISEEIEKMNQELKNVEKKQNKLNKYIETQKQKFTQLDLQDVEVREKIKHSKSKNKK
LQKQLEKDKEKLEEVRGVPASSEKAISEATARKEEMEKQKVKEEKKLEEVMESLKEETSG
LQQDKETKEKELMELSKAVNETRSRMDLAQSELDIYLSRHNTALTQLNTAKQTLQTTSDT
LRERRAAIKDLEVKIPQKEQELKKDAEALEQLMKTDNETKEVVRELRQKVDEAKSSLTSN
RSRGRVLDALMQQKKSGRIPGIFGRLGDLGAIEEKYDVAISSSCGALDNIVVDSIDTAQK
CVMFLKEQNIGFATFIGLDKMKVWERNMAPIRTPEETPRLFDMVRVKEESVRPAFYFALR
DTLVAQDMEQATRMAFQKDKRWRVVTLKGQIIEMAGTMTGGGRAMKGRMGSSLGTEVSQE
ELDRMESQLTEKVSKLQNCQEKRLQLEESVQRLRTLLRDMKNTLEKYSNSMTSLADQETH
LKLQMKELEANVLAAAPDKARQKQLEKSLAAFKKDFDAASSEAGKVETEVKRLHTLIVDI
NSHKLKAQQDKLDKINKELDDCSSIITKAKVAIKTADRNLKKCEESVSREQAELEDNEKS
MAELTEQLKKLEDEAGDVMKACQEAEAVLPEVQEQYQAVVKEIKALQLQEHAMQQDSLSV
RLRIEQIDTTITEHNSKIKHWQKEATKLSLHTVEGQPAEELPVLTSAQLEEIPNPNVIIN
EIITLETKCTHMKPNLGAIAEYKKKEELYLQRVAQLDQITTERDRFKQGYEDLRKQRLNE
FMTGFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGG
EKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNN
MFEIADRLIGIYKTHNTTKSVGINPKTIVFKEHDAVTA
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaacggcaaagagctcaactgcctcctccaagtcaaaagggaaagggtcg
cagccccgggatgactccgaagacgagctggatgtaccccctccacaaaccaagtccaat
ggccaagaggaggcaccgccgacaactgatgcgtctctgggggaagctgccgaggcggct
gataatcggagtttggaggagattctcggcagcatccctccacccccgcccccagcgatg
accaatgaaccgggcgctccacgcctgatgataacgcatttagttaatcgcaactttaaa
tcttactcaggagagcagattctggggccttttcacaagcgcttttcctgcatcattggt
ccaaatgggagtgggaagtccaatgtgatagattcaatgctctttgtgtttggatacaga
gctcaaaaaatcagatcaaaaaagctctcagtgctgattcacagctctgatcaacataag
gatgtgcaaagctgtactgtggaagtccattttcaaaagattattgataaggaaggagat
gactacgaagtcatccccaacagcaagttctatgtttccaggacggccaacaaagacagc
tcctcagcctatcatatcggtgacaaaaaagccacattcaaagaagtgggggttttactc
cggagccatggcattgacctcgaccacaacagatttctgatcttacagggtgaggtggag
cagatagccatgatgaagcccaaaggtcagacggagcatgacgagggcatgctggagtac
ctggaggacatcatcggctcctggcgcctcaagcagcccatcctgaccctggcccgccgc
atcgagctgctcaatgagcagaggggagagaagcttaaccgagtgaagctggtggaaaag
gagaagaatgcgttggagggagaaaagaacaaagctgtggagttcctcaccctggagaac
aacatcttcaaacacaagagtcggctctgccagtattacgtcgatgatctgcagaagcgt
gctgtggataaagatcaggagaagcagaggatcatggaggacaccaaggaactcactgag
aaaaatgcaaagatatcagaggaaattgagaaaatgaaccaggagctcaaaaatgtagaa
aagaaacaaaataaactgaacaagtacatagagacgcagaagcagaagttcacccagctg
gacctgcaggacgttgaagtgcgtgagaaaatcaaacactccaagagcaagaacaagaaa
ctgcagaagcagctggaaaaggacaaagaaaagctggaggaagtgcgcggggtgcctgcc
agcagtgaaaaggccatctctgaggcaaccgctcgcaaggaggagatggaaaagcagaaa
gtcaaagaagagaaaaaactggaggaggtgatggagagtctgaaggaagagaccagcggc
ttgcaacaggacaaagagaccaaagagaaggagctgatggagctcagcaaggctgtgaat
gagacccgctctcgtatggacctggctcagtcggagctcgacatctacctgagccgccac
aacacggcgctgactcagctcaacacggccaagcagacgctgcagacgacctctgacacg
ctgcgggagcgccgcgccgccatcaaggacctggaagtgaagatccctcagaaagaacag
gagctcaagaaggacgcagaagcgctggagcagctgatgaagacggataatgagaccaag
gaagtggtgagggaattgaggcagaaggtggacgaagccaagagctctctgacctccaac
cgcagccgaggaagagtcctggacgccctcatgcagcagaagaagagtggcagaatccct
ggcatcttcggaagattgggagacctgggagccatagaggagaagtacgatgtggccatt
tcctctagttgcggcgccctggacaacatcgtggtggatagcatcgataccgcccagaag
tgtgtgatgttccttaaagagcagaacatcggctttgcaactttcattggtctggacaag
atgaaggtgtgggagagaaacatggctcccatccgcactccagaggaaacccctcgtctc
ttcgacatggtgcgtgtgaaggaggagagtgtgcggccagctttctacttcgccctgagg
gacaccctggtggcccaggacatggagcaggccaccaggatggccttccagaaggacaag
cgctggagggtggtcaccctgaagggacagatcatcgagatggctggaaccatgactgga
ggaggacgagcgatgaagggcaggatgggctcctctctcggtacagaggtctctcaggag
gagcttgaccgtatggagagccagctgacggagaaagtgtcaaagctgcagaactgccag
gagaaaaggctgcagctggaggagagcgtgcagcggctgaggactctgctccgagacatg
aagaacactctggagaaatactccaacagcatgaccagtctggctgatcaggaaactcac
ctgaagcttcagatgaaggagctggaggccaacgtgctggctgctgcccccgacaaggcc
agacagaagcagctggagaagagcctggccgccttcaagaaagactttgacgcagcgtcc
agtgaggctggcaaggtggagacggaggtgaagcggctccacaccctcatcgtagacatc
aacagccacaagctgaaggcgcagcaggacaagctggacaagatcaacaaggagttagac
gactgctcctccatcatcaccaaggcgaaggtggccataaagaccgccgaccgcaacctg
aagaagtgtgaggagagcgtgagccgggagcaggcggagctggaggacaacgagaagtcc
atggcagagctcactgagcagctgaagaagctggaggacgaggcgggggacgtgatgaag
gcctgccaggaggctgaggcggtgctccccgaggtgcaggagcagtaccaggcggtggtg
aaggagatcaaggcgctgcagctgcaggagcacgccatgcagcaggattctctgagcgtg
cggctgcgcatcgagcagatcgacaccaccatcaccgagcacaacagcaagatcaagcac
tggcagaaagaggccaccaagctgtcccttcatacggtcgagggccagcccgcagaggag
cttcctgttctcacctcggcccaactggaagaaatccccaatcccaacgtcatcatcaac
gagataatcaccttggagaccaagtgcactcacatgaagcccaacctcggggccatcgct
gagtacaagaagaaggaggagctgtacctgcagcgcgtggctcagctggaccagatcacc
acggagagggaccgcttcaaacagggctacgaggacctgaggaaacagcgcctcaacgag
ttcatgaccgggttcaacatcatcaccaacaagctgaaggagaactaccagatgctcaca
ctgggtggcgacgcagagctggagctcgtcgacagcttggaccccttctctgaggggatc
atgttcagtgtgcgtcctccaaagaagagctggaagaagatctttaacctgtcaggagga
gagaagaccctcagctcgttggcgctggtgtttgctctgcaccactacaaacccaccccc
ctctacttcatggacgagatcgatgctgcgctcgatttcaagaacgtctccatcgtggcc
tgttacatttatgagcaaacaaagaacgctcagttcatcatcatctcgctgaggaacaac
atgttcgagatcgctgaccgtctcatcggcatctacaaaactcacaacaccaccaagagc
gtgggaatcaaccccaagaccatcgtgttcaaagagcacgacgcagtcactgcctaa
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