Notothenia coriiceps (black rockcod): 104955187
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Entry
104955187 CDS
T04920
Name
(RefSeq) PHD finger protein 1-like isoform X1
KO
K11467
PHD finger protein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104955187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104955187
03036 Chromosome and associated proteins [BR:
ncc03036
]
104955187
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
104955187
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104955187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
TFIIA
PHD_2
Chromo
DUF4537
Zip
Otopetrin
Motif
Other DBs
NCBI-GeneID:
104955187
NCBI-ProteinID:
XP_010780736
UniProt:
A0A6I9P2I3
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All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFAAGVEE
VCCICDAPPLKEPLINCLKCRHGYHPECHTPTIEPEADSDSWICRQCVFAVATKRGGALK
RGRFARLMQFMKLRLPYQLSSLDWDQQHLTNQQQCYCYCAGPGEWNLKMLQCASCGQWFH
EACTQCLTKPLLYGDRFYQFQCSVCTKGPETIQRLPMTWMDLAHLVLYHLSLCCKRKYFD
FDHEILSFTNENWDSLLLGALSDTPRQDRCHNLLNALNSHKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLITDPPINITHRRRSVPLSLPCQRRVGGPESRKSKRRIMETQVCPPP
AAANPIELLPCCQGYMGGASLYNSRKSEEELSLSSPPKRMYALYHTTYNGNSSLSRSLHH
YNSVEDTCRVPPPCYPYPLNSNGSLHHHPYQHQNNHQHNNQHQHNNHQHSLQHNHQHNHQ
QSHQHNNHQQNHQHSHQQQPGQKQLEPLILREMPPYQADNGGEGGGGGGGGGGAGGVLVG
GADGTVSRSCGGGEAVRILARRVTPDGKVQYLVEWENVNLY
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtaagtgaaggagatgatgtgttggctcgatggagtgatggactactgtac
ctcggcaatgtgaaaagagtagatggagtcaagcaatgttgtctggtgagattcgaggac
aactcggagttctgggtactgagaaaggacattcactcgttcgctgctggagtggaagaa
gtttgctgtatttgtgacgctccgcctcttaaagaacccctcataaattgtcttaaatgt
cgccacggttatcatccagagtgccacacgccaaccatcgaaccggaagctgacagcgat
tcctggatatgtcggcaatgtgtctttgcagtcgcaaccaagagaggcggggcgctcaaa
cggggacgcttcgcccggctcatgcaatttatgaaactccggcttccctaccagctgtcg
tctttagactgggaccagcagcatctgaccaatcagcagcagtgctactgctactgtgcc
ggacctggagagtggaacctgaagatgttgcagtgtgcgagctgcggtcagtggttccac
gaggcctgcacacagtgtctgaccaagccgctgctatatggagacaggttttatcagttc
cagtgctcagtatgtacaaagggaccagagaccattcaaagactacccatgacctggatg
gatttggctcatttagtgctctaccatctctcgctgtgctgcaagaggaaatactttgat
tttgaccatgaaatactgtccttcaccaatgagaattgggactccttgctcctaggcgcg
ctctctgacacgccaaggcaagaccgctgtcacaatctcctcaacgctctgaactcccac
aaggacaggtttgtctctggaaaggagataaagaagaagaagtgtctcttcgggcttcag
gtccgagccccgcctccgctgacgtctgattcgtcgcccctcatcacggacccacctatc
aacatcacgcaccggagaaggtcagtcccgttgtcactaccctgccagaggagagtgggg
gggccggagtctcgtaaatcaaagcgtcgcatcatggagacacaggtttgtcccccccca
gctgctgccaaccccattgagctgctgccatgttgccagggatacatgggaggggccagc
ctttacaactccaggaagtcagaggaggagcttagtttaagctctcctcccaagcggatg
tatgccctctaccacaccacatacaacggaaattcttcactctccaggagtcttcatcac
tacaacagcgtggaggacacctgcagagtaccaccaccttgctacccttaccccctcaac
tccaatggcagccttcaccaccacccctaccaacaccaaaacaaccaccaacacaacaac
caacaccaacacaacaaccaccagcacagcctccaacacaaccatcaacataaccaccaa
cagagccaccaacacaacaaccaccaacaaaaccaccaacacagccaccagcagcagccc
gggcagaagcagctggagcccctcatcctacgtgaaatgcccccataccaggcggacaat
ggcggagagggtggtggaggaggaggaggaggaggtggagcagggggggttttagttgga
ggtgcagatgggacagtgtccaggagctgcggaggaggggaggcagtgaggattttggcg
agacgcgtcacaccagacgggaaggtgcagtacctcgtggagtgggagaacgtgaatctg
tactga
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