Notothenia coriiceps (black rockcod): 104956306
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Entry
104956306 CDS
T04920
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3-like
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104956306
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncc02000
]
104956306
Transporters [BR:
ncc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104956306
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104956306
NCBI-ProteinID:
XP_010782081
UniProt:
A0A6I9P732
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All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MEPASYPEKNLMKDENNQNPATSNSAKRGQWANKREYILSVAGHIIGLGNVWRFPYLCFK
NGGGAFLIPYVVFLSTCGIPIFFLEVSLGQLTAQGGITCWRKICPIFGGLGYGTQVTLLY
SVVYYIVILAWAFLYLFSSFHTVLPWASCNNTWNTDNCFDCGQNYSVYRHINENATSSVK
EFWQRRVLGLSGGIEEMGNIRWDLAGCLLLSWIICYFSIWKGVKATGKVVYVTATFPVVM
LIVMLIRGLTLPGAVTGIRYYLYPDLTRLTDPQVWMDAGSQVLFSYCICVGSLQAMGSYN
KYNNNCYKDTFALCALNSLTSFFAGFTVFSVLGFMSHELGVDISTVAESGPGLAFIAYPL
ALSMMPLPQLWAAFFFIMIILLGLDSEFVCLEGLVTAISDRFPSSFLIGHRRKLVLLIIC
GVSFVIGLFMVTEGGLYVFLLFDYYACSGIPFMIFAILECVCVGWIYGADCYYDNIKE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggagccagcaagttatccagagaagaatctgatgaaagatgaaaacaatcaaaatcct
gctacctccaacagtgcaaagagaggccagtgggccaacaagagggagtacattttatct
gttgccggacatattattggtctgggcaatgtttggagatttccatatctgtgcttcaaa
aatggaggcggagctttcctgatcccctatgtggtgttcctgtccacatgtggaatcccc
atcttctttctagaggtatctctggggcagttaacggctcagggtgggatcacatgttgg
aggaaaatatgtcccatatttggaggtttaggctacggcactcaagttacattgttatac
agtgtggtgtattacattgtcatcctggcttgggccttcctctacctcttctcctccttc
cacactgtactcccctgggccagctgcaacaacacctggaacacagataactgctttgat
tgtggacagaattattcagtttatcgccacatcaatgaaaatgcaacatcatcagtgaaa
gaattctggcagaggagagtcttgggtttgtctggaggaattgaagagatgggcaatatc
cgctgggacctggctggatgtcttctgctaagctggatcatctgttacttctctatctgg
aaaggagtcaaggcgacaggaaaggttgtgtacgtcacagccacttttccagttgtgatg
ttgattgtgatgctgatccgtgggctgacattgccaggagctgtaactggaattagatat
tacctttatcctgatctgacccgtctgactgatcctcaggtgtggatggatgctgggagc
caggtattgttctcctattgcatttgcgtaggcagtttgcaagcgatgggaagctacaac
aaatacaataacaactgctacaaagacactttcgccttgtgcgcactgaacagtttaacc
agcttttttgctggctttacagtcttctctgttctcggcttcatgtcgcatgaattgggt
gttgacatctcaacagtagctgaatcaggtcctggcctggcattcattgcttaccctctg
gctttatccatgatgcctttacctcaactctgggctgccttcttcttcatcatgattatc
cttcttggattggacagtgagtttgtgtgtctggaaggcctggtgacagccatatcagac
aggtttccatcctcctttctcattggtcatcgacgtaaactagttctgctgatcatctgt
ggcgtttcctttgttattggcctgtttatggtgactgagggaggactgtatgtatttctg
ctgtttgattactatgcttgcagtggaataccattcatgatttttgccattttggagtgc
gtctgtgtgggatggatatatggtgctgattgttattatgacaatataaaggaa
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