Notothenia coriiceps (black rockcod): 104962542
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Entry
104962542 CDS
T04920
Name
(RefSeq) eukaryotic initiation factor 4A-I-like
KO
K03257
translation initiation factor 4A
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104962542
03012 Translation factors [BR:
ncc03012
]
104962542
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncc04147
]
104962542
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104962542
mRNA cycle factors
Stress granule specific factors
104962542
Translation factors [BR:
ncc03012
]
Eukaryotic type
Initiation factors
eIF-4
104962542
Exosome [BR:
ncc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104962542
Exosomal proteins of bladder cancer cells
104962542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
UvrD-helicase
CMS1
Helicase_RecD
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
104962542
NCBI-ProteinID:
XP_010789292
UniProt:
A0A6I9PMA9
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MSAEYDNRENGPEGMEPDGVIESNWTEITDSFDEMALREALLRGIYAYGFEKPSAIQQRA
IMPCIKGYDVIAQAQSGTGKTATFAISILQQIDVELKGTQALVLAPTRELAQQIQKVVLA
LGDYMGASCYACIGGTNIRNEVQKLQAEAPHIVVGTPGRVFDMLSRKNLSAKYIKMFVLD
EADEMLSRGFKDQIYEIFQKLASSTQLVINVHYVSPQARGIDVQQVSLVINYDLPTNREN
YIHRIGRGGRFGRKGVAINMVTEDDKRTLRDIETFYNTTVEEMPMNVADLI
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgaatatgacaatagagagaatggcccggaaggcatggagcccgatggggtc
atcgagagcaactggaccgagatcacggacagtttcgatgagatggctctgcgtgaggct
ctcctcagaggaatctatgcctatggttttgagaagccctctgctatccagcagagagcc
attatgccttgtatcaagggttacgatgtgatcgctcaggcccaatctggcactgggaag
actgccacctttgccatctccatcctccagcagattgatgtggagctgaaaggcactcag
gctctggtcctggctcccaccagggagctggctcagcagatccagaaggtggttctggcc
ttgggcgactacatgggagccagttgctacgcttgtatcggagggaccaacattcgcaat
gaagtgcagaaactgcaagctgaagcccctcacattgtggtgggaacccccggccgcgtc
ttcgacatgttgagtcgcaaaaacctctctgccaagtacatcaaaatgtttgttctggat
gaggccgacgagatgcttagtagagggttcaaggaccagatctatgagattttccagaaa
ctggcaagcagcacacagcttgtaattaatgttcactatgtttctcctcaggccagaggt
attgatgttcagcaggtgtccctagtcatcaactacgacctgccgaccaacagggagaac
tacatccacaggattggtcgcggtggtcgttttggcagaaagggtgtagccatcaacatg
gtgactgaggacgacaagcgaaccctgagggacattgagacattctacaacaccaccgtc
gaggagatgcccatgaatgtggccgaccttatctag
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