Nocardiopsis changdeensis: KGD84_21535
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Entry
KGD84_21535 CDS
T08932
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KGD84_21535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncg03400
]
KGD84_21535
Enzymes [BR:
ncg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KGD84_21535
DNA repair and recombination proteins [BR:
ncg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KGD84_21535
Prokaryotic type
KGD84_21535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QUX21019
UniProt:
A0ABX8BFJ7
LinkDB
All DBs
Position
4775958..4776632
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AA seq
224 aa
AA seq
DB search
MATKDLNEIMEAGWAKALEPVAPQITAMGDFLRQEVAEGRTYLPAGEHVLRAFQQPFKDV
RVLIVGQDPYPTPGNPVGLSFSVAPGVRPPASLKNIYKEMQDDLGLPIPNTGDLTPWTKQ
GVLLLNRVLTVQPGSPASHKGKGWEAITDQAIRALAERGGPLVAILWGRQARDLRPLMPG
VPCVESAHPSPMSARNGFFGSKPFSRTNEMLKEQGAEPVDWSLT
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaggacctcaacgaaatcatggaagccgggtgggcgaaggccctggagccg
gtcgcgccgcagatcaccgcgatgggtgacttcctccgacaggaggtcgccgaggggcgc
acctacctgcccgccggcgaacacgtcctgcgcgctttccagcagccgttcaaggacgtc
cgcgtgctcatcgtgggccaggacccctaccccacgcccggcaacccggtggggctgagc
ttctccgtcgcccccggtgtccggccgcccgcgagcctgaagaacatctacaaggagatg
caggacgacctgggcctgccgatcccgaacaccggcgacctcaccccgtggacgaagcag
ggcgtgctgctgctcaaccgggtcctgaccgtgcagcccggttcgcccgcctcccacaag
ggcaagggctgggaggccatcaccgaccaggccatccgggcgctggccgagcgcggcggg
ccgctggtggcgatcctgtggggccgccaggcgcgcgacctgcggccgctgatgcccggg
gtcccgtgcgtggagtcggcgcacccgagcccgatgtcggcgcgcaacgggttcttcggg
tccaagccgttcagccggacgaacgagatgctcaaggagcagggcgcggagccggtggac
tggagcctgacctag
DBGET
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