Nocardiopsis changdeensis: KGD84_26420
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Entry
KGD84_26420 CDS
T08932
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg02024
Quorum sensing
ncg03060
Protein export
ncg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
KGD84_26420 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KGD84_26420 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KGD84_26420 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ncg02044
]
KGD84_26420 (ffh)
Enzymes [BR:
ncg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
KGD84_26420 (ffh)
Secretion system [BR:
ncg02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
KGD84_26420 (ffh)
Eukaryotic Sec-SRP protein
KGD84_26420 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
nSTAND3
CbiA
Zeta_toxin
MMR_HSR1
cobW
ArsA_ATPase
APS_kinase
AAA_18
AAA_31
TsaE
AAA
AAA_33
nSTAND_NTPase5
AAA_16
AAA_25
AAA_30
NACHT
NPHP3_N
6PF2K
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
QUX21874
UniProt:
A0ABX8BI13
LinkDB
All DBs
Position
complement(5917433..5919025)
Genome browser
AA seq
530 aa
AA seq
DB search
MFETLSDRLTSVFSSLRGKGRLSEEDINATAREIRLALLEADVALPVVRDFIARIKERSR
GEEVSKALNPAQQVIKIVNEELIEVLGGETRQIRYAKNPPTVIMLAGLQGAGKTTLAGKL
AKWLAAQRNTPLLVAADLQRPNAVTQLQVVGERAGAPVFAPEPGNGVGDPVEVARGSIEF
ARRNNHNIVIIDTAGRLGVDTEMMQQAADIRDAVSPDEIIFVVDAMIGQDAVNTAQAFLD
GVGYDAVALTKLDGDARGGAALSIRHITGRPIMFASTGEKLDDFDLFHPDRMASRILDMG
DVLTLIEQAQRTFDEAEVQKMASTMASDEDFTLDDFLQQMMMVRKLGPIGNLLGMMPGMG
QMREQIDNIDDKALDRLQAIIQSMTPGERANPKMINGSRRLRIANGSGTQVGDVNNLVTR
FFEAQKVMRKMKNGGMPGIPGMPGMGGGGGARKKAKAQQKKKGKQRSGNPMKARQQELER
QQRRKEQQENAQPQLPPGLGGGKQPQLPPAFGGGGMPNMPDLSGFKLPEK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgagacgctttccgaccggctgacatcggtcttctcctcgctgcggggcaagggg
cgcctgtccgaggaggacatcaacgcgaccgcgcgggagatccgtctcgcgctgctggag
gcggacgtcgccctgcccgtggtccgtgatttcatcgcgcggatcaaggagcgctcccgg
ggcgaggaggtctccaaggccctcaacccggcccagcaggtcatcaagatcgtcaacgag
gagctcatcgaggtcctcggcggcgagacccggcagatccgctacgccaagaacccgccc
accgtcatcatgctggcgggcctccagggcgccggtaagaccaccctggcgggcaagctc
gccaagtggctggccgcgcagcgcaacacgccgctgctggtcgccgccgacctccagcgt
cccaacgcggtcacccagctccaggtcgtcggcgagcgcgccggcgcccccgtcttcgcg
cccgaacccggcaacggcgtgggcgacccggtcgaggtcgcgcgcggttccatcgagttc
gcgcggcgcaacaaccacaacatcgtcatcatcgacaccgccggccgcctcggtgtggac
accgagatgatgcagcaggccgcggacatccgcgacgccgtgtcgccggacgagatcatc
ttcgtcgtcgacgcgatgatcggccaggacgcggtcaacaccgcccaggccttcctggac
ggggtcggctacgacgcggtcgccctcaccaagctcgacggcgacgcgcgcggcggtgcc
gcgctgtcgatccggcacatcaccggccgtcccatcatgttcgcctccaccggcgagaag
ctggacgacttcgacctgttccacccggaccggatggcctcgcgcatcctggacatgggt
gacgtgctcacgctcatcgagcaggcgcagcgcacgttcgacgaggccgaggtccagaag
atggcctcgacgatggcgtcggacgaggacttcacgctggacgacttcctccagcagatg
atgatggtccgcaagctcggccccatcggcaacctgctcggcatgatgcccggcatgggc
cagatgcgcgagcagatcgacaacatcgacgacaaggccctggaccgcctccaggcgatc
atccagtcgatgacgcccggcgagcgggccaaccccaagatgatcaacggctcgcgccgg
ctgcgcatcgccaacggttcgggcacgcaggtcggcgacgtcaacaacctggtcacccgg
ttcttcgaggcgcagaaggtcatgcgcaagatgaagaacggcggcatgcccgggatcccc
ggcatgcccggcatgggcggtggcggcggggcccgcaagaaggccaaggcccagcagaag
aagaagggcaagcagcgcagcggcaacccgatgaaggcccgccagcaggagctggagcgc
cagcagcgccgcaaggagcagcaggagaacgcccagccgcagcttccgccggggctcggc
ggcggcaagcagccgcagctgccccccgcgttcggcggcggcggaatgccgaacatgccc
gacctgtcgggattcaagctgcctgagaagtag
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