Nostocales cyanobacterium HT-58-2: BZZ01_24950
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Entry
BZZ01_24950 CDS
T04905
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ncn
Nostocales cyanobacterium HT-58-2
Pathway
ncn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BZZ01_24950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncn03021
]
BZZ01_24950
03400 DNA repair and recombination proteins [BR:
ncn03400
]
BZZ01_24950
Enzymes [BR:
ncn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BZZ01_24950
Transcription machinery [BR:
ncn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BZZ01_24950
DNA repair and recombination proteins [BR:
ncn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BZZ01_24950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ARV61441
LinkDB
All DBs
Position
6038370..6041669
Genome browser
AA seq
1099 aa
AA seq
DB search
MTNETIMEPAFLLPDLIEIQRSSFRWFLEEGLIEELNSFSPITDYTGKLELHFLGQNYRL
KEPKYSVEEAKRRDSTYAVQMYVPTRLINKETGEIKEQEVFIGDLPLMTDRGTFIINGAE
RVIVNQIVRSPGVYYKSEIDKNGRRTYSASLIPNRGAWLKFETDRNDLVWVRIDKTRKLS
AQVLLKALGLSDNEIFDALRHPEYFQKTIEKEGQFSEEEALMELYRKLRPGEPPTVLGGQ
QLLDSRFFDPKRYDLGRVGRYKLNKKLRLQVPEPVRVLTPQDILAAVDYLINLEYDIGST
DDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSDAEVLTPASLVNPKPLVAAI
KEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFAVRDIHPSHYGRICPVE
TPEGPNAGLIGSLATHARVNQYGFLETPYRPVENGRVRFDLPPVYMTADEEDDLRVAAGD
LPIDENGNIIGPQVTVRYRQEFSSTTPEQVDYVAVSPVQIVSVATSMIPFLEHDDANRAL
MGSNMQRQAVPLLKPERPLVGTGLEAQAARDSGMVIVSRTDGEVTYVDATEIRVRPKPNA
PEIKYPISKYHRSNQDTCLNQKPLVYIGERVVAGQVLADGSSTEGGELALGQNIVVAYMP
WEGYNYEDAILISERLVQDDIYTSIHIEKYEIEARQTKLGPEEITREIPNVGEDALRQLD
EQGIIRIGAWVESGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGEKG
RVVDVRLFTREQGDELPPGANMVVRVYVAQKRKIQVGDKMAGRHGNKGIISKILPFEDMP
YLPDGSTVDIVLNPLGVPSRMNVGQVFECLLGWAGHTLGVRFKLTPFDEMYGEESSRSIV
HGKLQEARDETGKNWVYNPDDPGKILVYDGRTGEPFDRPVTVGVAYMLKLVHLVDDKIHA
RSTGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNEAL
NAIVKGKAIPRPGTPESFKVLMRELQSLGLDIAVHKVETQADGSSLDVEVDLMADQGNRR
TPPRPTYESLSRESLEEEE
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgaaacaattatggaacccgcctttttgttgcccgatttgatagaaatccag
cgttctagcttccggtggtttctagaagaagggttgatagaagaacttaactcctttagt
cctatcacagactacactggcaaactagagctgcactttttgggtcagaactacaggctt
aaagagccaaagtacagtgtagaagaagcaaagcggcgggatagtacctacgcggtacaa
atgtatgtccccactcgtttgattaacaaagaaacgggagaaatcaaagaacaagaagtc
tttattggggatctgcctttgatgacagaccgaggcacttttatcattaacggtgccgag
cgagttattgtcaaccagatcgtgcgatcgccaggagtgtactacaaatcagaaattgac
aaaaacgggcgacgtacctattctgctagcttaatcccaaaccggggagcatggctgaaa
tttgaaacagaccgtaatgacttggtgtgggtccgtattgacaaaacccgtaaactgtcg
gcgcaagtcctcctcaaagcacttggattgtcagacaacgaaatttttgacgccttacgt
cacccagaatacttccaaaaaacaattgagaaagaagggcaattttccgaagaagaagcc
cttatggagttgtatcgcaaactccgtcctggtgaaccgcccacagtgttgggaggacaa
caactcctagattcgcgcttctttgacccgaaacgctatgacctgggtcgcgtcggacgt
tacaagcttaacaagaaactgcgcttgcaagtgccagaaccagtgcgcgttttgactccc
caagacatcttggcagcagtagattacctcattaaccttgagtatgatatcggtagcact
gacgatattgaccacttaggaaaccgccgagtcagaagcgtaggcgaattgctgcaaaac
caagtacgcgttggtttaaaccgcttagaacggatcattcgggaaaggatgaccgtatct
gatgcggaagtgctaaccccagcttcgttggtaaaccccaaaccattggtagcagccatc
aaagaattctttgggtctagccaattgtcgcagttcatggatcagacaaatcctctagca
gaactgacccataaacgccgtttgagcgcacttggtcctggaggtctcacccgtgaacgt
gcaggttttgcagtcagggatattcacccatcccactacggacgcatttgcccagtagaa
actccagaaggtcccaacgctggtttgattggttccttggcaacgcatgctcgtgttaac
cagtacggctttttggaaacaccctatcgacccgtagaaaacggacgggtgcggtttgac
ttaccacctgtgtacatgaccgcagatgaagaagatgatctgcgggttgctgctggtgac
ttaccaattgacgagaatggtaatatcatcggaccgcaagtcacagtacgctatcgccag
gaattctcctcaaccacgccagaacaagtggattatgtggcagtttcccctgtacaaatt
gtgtctgttgctaccagtatgattcccttcttggagcacgatgacgctaaccgtgcacta
atgggatcgaatatgcaacggcaagcagttcctctgttgaaaccagagcgtcctttggtg
ggaacaggcttggaagctcaggcggcaagggactccggtatggtgatcgtatcgcgcacc
gacggtgaagtgacctatgtagacgcgacagaaattcgcgtgcgtcccaaacccaatgct
cctgaaattaagtaccccatttccaagtaccatcgctccaaccaagatacctgtctcaac
caaaaaccattggtatatataggtgaacgcgttgtagcaggtcaagtgctagcagatggc
tcctccactgaaggaggggaattggcactgggacaaaacatcgtcgtcgcttatatgcct
tgggaaggctataactacgaagacgcaattttgatttctgaacgtctggtgcaggatgat
atctacacctcaatccacattgaaaaatatgaaattgaggcaagacaaacaaaactggga
ccagaagaaattaccagagaaatccccaacgttggggaagacgccttacgccagttagat
gaacaaggaatcattcgcattggcgcgtgggtagaatctggggatatcttggtaggaaaa
gtgacaccgaaaggtgaatctgaccagccaccagaagaaaagctcctgcgagcaattttc
ggtgaaaaagcacgggatgtgcgagacaactccctaagagtgccaaacggtgaaaaagga
cgcgtcgtagatgtgcgcttattcacccgagaacaaggcgatgaactgccaccaggggca
aacatggtcgtgcgggtgtatgtagcgcagaagcgcaaaattcaagtcggcgacaaaatg
gcaggacgtcacgggaacaagggaatcatttccaaaatcctgccttttgaagatatgccc
tacttaccggatggttccacagtggacattgtgcttaatcccttgggcgtacctagccgg
atgaacgtcggacaagtgtttgagtgtcttttaggttgggctggtcacaccctaggagtc
cggtttaagctgactccctttgacgagatgtatggcgaagagtcatctcgtagcatcgtg
catggaaagttgcaagaagcacgggatgaaacaggcaaaaactgggtctataacccagat
gatcctggaaaaattctggtctacgacggtcgtacaggcgaaccctttgatcgaccagtc
actgtgggtgtcgcttatatgttgaagctcgttcacttagtagacgacaaaatccacgcc
cggtctacaggtccatactcgttggttacccagcagccgttgggtggtaaagcacaacaa
ggtggtcagcggttcggtgaaatggaggtgtgggcattggaagcctttggtgctgcctat
accttgcaggagttgctcactgtgaaatcagacgatatgcaaggacggaatgaagccctc
aatgcgatcgtcaaaggtaaggcaattcctagacctggaacgccagaatctttcaaagtg
ttgatgcgagaactgcaatctctgggtttagatattgccgtgcataaggtagagacacag
gcagatggtagctccttggatgtcgaagtcgatttgatggcagatcaaggaaatcgtcgt
acgcctccacgtccaacctatgaatccttgtctcgcgagtcgctggaagaagaggaataa
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