Nymphaea colorata (blue-petal water lily): 116252156
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Entry
116252156 CDS
T07418
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00040
Pentose and glucuronate interconversions
ncol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116252156
Enzymes [BR:
ncol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116252156
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
116252156
NCBI-ProteinID:
XP_031482114
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Position
4:24805509..24808531
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AA seq
488 aa
AA seq
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MVMMLLHPLCVIILLYHIAPVFPLPNSPPPHHHQNVSVYDSEAIVRSVQMKVEESVRRRR
MLGSGGGSCMTGNPIDDCWRCDPNWGRNRQRLADCAIGFGKDALGGRNGRIYVVTDPSDR
DPVNPAPGTLRYGVIQTEPLWIVFARDMVIRLNEELIMNSFKTIDGRGANVHIAGGACIT
IQYVSNIIIHGVHIHDCVPAGNANVRSTPNHYGYRSKSDGDGVSIFAGKNIWVDHCTLSN
CADGLIDAIMGSTAITISNNYFSHHDEVMLLGHSDSYTPDTSMQVTIAFNRFGEALVQRM
PRCRLGYFHIVNNDFTEWQMYAIGGSANPTINSQGNRYIAPTDPNAREVTKRVDTDEKDW
ARWNWRTEGDQMVNGAFFVPSGDGLSATYEKASSVEPKSAGLIDQLTQNAGAIGSTPRSN
GGVSMLYPGGGTGGDAGVDGGYGGGFGGYMGMTFRGGAVRSSPSNCWWAVAVVLVLLELL
LPSSVLYY
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgatgttactccatcccctctgtgtcatcatcctcttatatcacatagccccc
gttttccccctccccaactcaccacctccccaccaccaccaaaatgtgagtgtctatgac
tctgaagccattgttcgctcggtccaaatgaaagtggaggaatcggtgaggaggcggcga
atgctgggctccggcggcgggtcctgtatgacggggaacccaatcgacgactgctggcgg
tgcgacccgaactggggcaggaaccggcagcgactggcggactgcgcgattggattcggg
aaggacgcgctggggggaaggaatgggcggatctacgtggtgacggacccgtcggacaga
gacccggtgaacccggcgccggggacgctgcgttacggcgtcatccagacggagccgctg
tggatcgtgttcgcacgggacatggtgatcaggctgaacgaggagctgataatgaacagc
ttcaagacgatcgacgggcggggggcgaacgtgcacatcgccggcggggcctgcatcact
atccagtacgtgtccaacatcatcatccacggggtgcacatccacgactgcgtcccggcc
ggcaacgccaacgtcaggtcgacgccgaaccactacgggtacaggagcaagtcggacggc
gatggggtgtcgatattcgcagggaagaacatatgggtagaccactgcacgctgtccaac
tgcgctgacggcctgatcgacgccatcatggggtcgacggcgatcaccatctccaacaac
tacttctcccaccacgacgaggtgatgctgctgggccacagcgactcctacaccccggac
acttcgatgcaggtcaccatcgccttcaaccgcttcggcgaggctctggtccagcgcatg
ccccgctgccgcctcggctacttccacatcgttaacaacgacttcaccgagtggcagatg
tacgccatcggcggcagcgccaatcccaccatcaacagccagggaaaccgctacatcgcc
cccaccgaccccaacgcccgagaggtgacgaagagggtggacacggacgagaaggactgg
gcgcggtggaattggaggacggagggcgaccagatggtcaacggcgccttcttcgtgccg
tcgggagacgggctgagcgccacctacgagaaggcatccagcgtcgagcccaagtccgcc
ggcctcatcgaccagctcacccagaacgccggcgctatcggctccactcccaggagcaac
ggcggcgtgagcatgctgtacccgggaggggggaccggcggcgatgccggtgtcgacggt
gggtacggcggtgggtttggtgggtacatgggtatgactttcaggggcggtgcggttcgc
tcatcgccgtcgaattgctggtgggcggtggccgtcgttcttgtcttgctcgaattatta
ttgccatcctccgtcctgtattattag
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