Nymphaea colorata (blue-petal water lily): 116252167
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Entry
116252167 CDS
T07418
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00040
Pentose and glucuronate interconversions
ncol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116252167
Enzymes [BR:
ncol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116252167
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116252167
NCBI-ProteinID:
XP_031482131
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Position
4:complement(25224282..25229757)
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AA seq
444 aa
AA seq
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MADGCGRAAWTVTLLLALIGSSGCLGEAARSLRSELAGGPAEVSFEEKRALGWQNISLLH
PHAVDNPELVAAEVYRVMENGTRRRSLGYLSCGTGNPIDDCWRCDPNWANNRQRLADCGI
GFGSKAIGGRDGRIYVVTDSSDDDPVNPRPGTLRYAVIQDEPLWIVFKRDMVIVLKEELI
MNSYKTIDGRGANVHISNGACITVQYVTNIIIHGIHIHDCKPTGNAMVRSTPRHYGWRTM
ADGDGVSIFGSSHIWVDHCSFSNCADGLVDAVIASTAITISNNYFTHHDKVMLLGHSDSY
ENDKAMQVTIVLNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNR
YLAPDNPFAKEVTKRVDTPDSAWKDWHWRSEGDLMLNGAFFVPSGSGASNSYAKASSLGA
KSSSMVPSMTANAGVLNCRAGAVC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggttgtgggagggcggcatggacggtgacgttgcttcttgcgcttatcggc
tctagtggatgcctcggagaagcggcccggagtctccggagcgagttggcgggaggcccg
gcagaagtcagtttcgaggagaagagagcgctgggctggcaaaacatctcgctcttgcac
ccgcacgccgtggacaacccagagcttgtcgctgcagaagtgtacagggtcatggaaaac
ggcacgaggagaaggtctctgggctacctctcctgcggcacgggcaatcccatcgacgac
tgctggcgttgcgaccctaactgggccaacaaccgccagaggctcgccgactgcggcatc
gggtttggtagcaaagccattggtggccgtgacggccgcatctacgtcgtgaccgactct
tccgacgatgaccccgtgaacccgaggccggggacccttcgctacgccgtcatccaggac
gagccactctggatcgtgttcaagcgcgacatggtcatcgtcctcaaggaggagctcatc
atgaacagctacaagaccatcgacggccgcggggcaaacgtccacatctccaacggcgcg
tgcattaccgttcagtacgtgaccaacatcatcatccacggcatacacatccacgactgc
aagccgacaggcaacgccatggtcaggagcacgcctagacactatggttggaggaccatg
gccgatggagacggggtctccatattcgggtccagccacatctgggtagatcactgctcc
ttctctaattgcgccgacgggcttgtcgacgccgtgattgcatcgaccgccattaccatt
tcgaacaattacttcacccaccatgacaaggtgatgctgttgggtcacagtgatagttac
gagaatgacaaagctatgcaggtaaccatcgtcctcaaccactttggagaagggctagtc
cagaggatacccaggtgcaggcatggttactttcatgtggtgaacaatgattacacacac
tgggagatgtacgctattgggggaagcgcgtcccccacaatcaacagccagggaaaccgg
tacctggccccagataaccccttcgccaaggaggtaacaaagcgagtggacacaccggac
agtgcatggaaagactggcattggagatcggaaggcgacctgatgctgaacggagccttc
ttcgtaccctcgggatcaggtgcatccaacagctatgccaaagcatctagcctcggggcc
aaatcgtcgtccatggttccttccatgaccgccaatgctggcgttctgaactgcagggca
ggggccgtatgttag
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