Nymphaea colorata (blue-petal water lily): 116259497
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Entry
116259497 CDS
T07418
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00450
Selenocompound metabolism
ncol00970
Aminoacyl-tRNA biosynthesis
ncol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
116259497
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116259497
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncol01007
]
116259497
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncol03016
]
116259497
Enzymes [BR:
ncol01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
116259497
Amino acid related enzymes [BR:
ncol01007
]
Aminoacyl-tRNA synthetase
Class I (U)
116259497
Transfer RNA biogenesis [BR:
ncol03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
116259497
Prokaryotic type
Other AARSs
116259497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
Toprim
HVO_0758
GAF_3
Motif
Other DBs
NCBI-GeneID:
116259497
NCBI-ProteinID:
XP_031493212
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All DBs
Position
8:3229574..3237112
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AA seq
617 aa
AA seq
DB search
MATARAIPSSQFFPPIVANFKSKNLQCFRFNFHYHHPGRRPSSLSPSLASSVRCSSNSPE
SSGSAASKPEVFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLMGKKVIFVTGTDEHG
EKIATAASANGRRPKEHCDTISQAYRMLWKDLDISFDKFIRTTDSSHEAIVKEFYSRVLE
KGDIYRARYEGLYCVNCEEYKDEKDLDEHHSCPIHLKPCVPRREENYFFALSKYQKRLEE
YLEQNQQFVQPSYRLNEVRSWVEDGLRDFSISRASVEWGIPVPNDGDQTIYVWFDALLGY
ISSLLEAGIEPNLQNAVSSGWPASLHLIGKDILRFHAVYWPAMLMSAGLSLPKIVFGHGF
LTKDGKKMGKSLGNTLEPKNLVSRFGSDAVRYFFLREVEFGNDGDYSEERFINIINANLA
NTIGNLLNRTLGLLKKNCQSTLVVDSAIAASGNPFRQTVEGLVDKARLHFENLSLSTACA
SVLEIGNAGNLYIDEHAPWLKFKAGGASAEAAARDLVTILEAVRIIAVALSPITPSLCLR
IYSQLGYSKDEFDAITWNDTAWGGLKEGQIMREPAPIFARIEIEDKEEGKDEDQPPKKAS
KMKKRLPQAQGAAQAQA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcaagagcgattccttcctcgcagttcttccctcccatcgttgccaacttc
aaatccaagaacctacaatgctttcgtttcaatttccactaccaccatccaggaagaaga
ccatcatcactctcaccatccctagcttcctccgtcaggtgttcttctaacagcccggag
tcctctggttctgctgcctctaaaccagaagtgttcgttctcacgactcccctttactac
gtgaacgcccctccccacatgggaagcgcctacaccaccattgcggcggacgccatagcg
cggtttcagaggctaatggggaaaaaagtaatattcgtaactggaactgatgagcacggg
gagaagattgcaacggctgcatctgcgaatggccgaaggcccaaggagcactgtgacacc
atctctcaagcttacaggatgctctggaaagatctagatatttcttttgacaaatttatt
cgaacgactgattcatcccatgaagctattgtgaaggaattctactctagagttcttgaa
aaaggcgacatataccgtgcccgatatgaaggtctgtactgtgtcaactgcgaggaatat
aaggatgagaaggacttggatgaacaccactcttgtccaatacatctgaaaccttgtgtt
ccacgaagagaggaaaactatttttttgctttgtccaagtatcagaagcgtcttgaggaa
tatcttgaacagaatcaacaatttgtccagccatcttatcgtctaaatgaagtaagaagt
tgggtggaggatggtttgagggatttttctatttcgcgtgcatcagtagaatggggaata
cctgtcccaaatgatggtgaccaaaccatatatgtttggtttgatgctctattgggctat
atttcatcgcttctggaggcaggaattgaaccaaatttacaaaatgctgtttcttctggt
tggcctgcttcactgcatttaataggaaaggatatcttgaggtttcatgctgtctactgg
cctgcaatgctgatgtcagctggattaagtcttccaaagatagtttttggtcatggattc
ctgacaaaggatggtaagaagatgggaaaatctttaggaaacacacttgaaccaaaaaat
cttgtgtctaggtttggatctgatgcagtgaggtacttcttcttgagagaagtggaattt
ggaaacgatggtgactattcagaagaacggtttataaacatcatcaatgctaatcttgca
aacacaattggcaatcttcttaaccgcacgcttggacttttgaagaagaactgccaatct
acattggtggttgattcagctattgcagcttcaggaaatccattcagacagactgtggaa
ggactggtagacaaagcaaggctccatttcgagaatttgtctttgtcaactgcttgtgct
tctgtgttggagattggaaatgctggtaatctgtatatagatgagcatgctccatggttg
aaattcaaagctgggggtgctagtgctgaagctgctgccagggatttggttaccatattg
gaagctgtgaggatcatagcagttgccttgtcaccgataactcctagcctctgtttgcgc
atatattcacagctcggttactcgaaggatgaatttgatgcaattacttggaacgataca
gcatggggaggacttaaggaaggtcagataatgagagagcctgcacctatatttgcaaga
attgagattgaagacaaagaggaaggaaaggatgaagatcagccaccaaaaaaggcatca
aagatgaagaagagattaccacaagctcaaggggctgcacaggctcaggcatga
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