Nymphaea colorata (blue-petal water lily): 116260864
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Entry
116260864 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116260864
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116260864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116260864
03016 Transfer RNA biogenesis [BR:
ncol03016
]
116260864
Enzymes [BR:
ncol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
116260864
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
116260864
Transfer RNA biogenesis [BR:
ncol03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
116260864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
TUTase
PAP_NTPase
Polbeta
DNA_pol_B_palm
Cut8
Motif
Other DBs
NCBI-GeneID:
116260864
NCBI-ProteinID:
XP_031495245
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All DBs
Position
9:complement(1693485..1714162)
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AA seq
586 aa
AA seq
DB search
MDETGFVYETLGALVPSSPLSGSDGTATAAATFDCGEPDGFSFSYNVLRNEIGGGEDSDR
IPTTLATEDDAVDYFPLQLDPLETPPRLIVPVEEVEDGEEDEKRRGGEEEKAERSGLGLD
FSFESGAYRRIKSPMLQLHKEIVDFCDFVAPTQEEQASRAAAVNRIFEVIKYIWPHCEME
VFGSFKTGLYLPTSDIDVVILNSNIQNPQIGLRALSRALSQKNLAKNIQVIGKARVPIIK
FVEKQSAVAFDISFDTLGGPEAAKFIKDAVAKLCPLRPLSMILKLFLQQRGLNEVYSGGL
GSYALLVMLIAYIQMQWKGQGFHGGQRIVEHNLGILLVKFFEFYGRKLNTSDVGISCNAG
GAFFLKSSKGFMKFERPHLISIEDPQEPTNDIGKNSYNFSQVRSAFAAAYSTLTDARTLA
ALGPKRSILGLIIRPDPTLLERKAGVNGELTFDALFPGAGDPVERERNGRKMLFNWQSDG
SDDALPRNRKGDKLEQSLQKSIKKKKLRKRKGEDGVVASSKSKHRRRKGEDFAKESPKKI
THSKAEREGGSVKKKRKTKQLEGYESGPKDRSRDRYRGGARSWAPY
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacgggttttgtgtatgaaactctaggggcgctcgtaccctcttctcccctc
tcaggaagcgatggcaccgccaccgcggctgccacgttcgactgcggcgagcccgacggc
ttctctttctcgtataacgtcctgaggaacgagataggaggaggagaggatagcgacaga
atccccactaccttggccacggaggacgacgccgttgactactttcctctgcaactggac
cccctcgagacgcctcctcggttaattgtccccgtagaggaggtagaagatggagaagaa
gacgagaaaagaagaggaggagaggaggagaaagcggagaggtcagggttagggctggac
ttcagtttcgagagtggcgcttatcggcgaatcaagagccccatgcttcagcttcataaa
gagatagttgatttctgtgactttgttgctccaacacaagaagagcaagcatctcgggca
gctgcagtcaaccgtatttttgaagttatcaaatatatatggccacattgtgagatggaa
gtgttcggttcattcaaaactggcctttatttacctaccagtgatattgacgttgtgatt
ttgaattcgaatattcaaaatccacaaattggattacgagcactttctagagcactgtca
caaaagaatttggcaaaaaacatacaggtcattgggaaagcgcgtgtccccatcatcaag
tttgtggagaaacaaagtgctgttgcttttgatataagctttgatacgcttggtggtcca
gaagctgcaaaatttatcaaggatgcagttgcaaaattgtgcccattgcggcctttatcc
atgattctaaagttgttcttacaacagaggggacttaatgaggtgtattcagggggactt
ggttcttatgcacttctcgtcatgcttatagcatatattcagatgcaatggaaggggcag
ggtttccatggtggccagagaattgtggaacataacctgggaattcttctggtcaagttt
tttgaattttatggacgtaagctaaacacaagtgatgttgggatttcttgcaacgcggga
ggagcctttttcctgaaaagtagcaaaggttttatgaagtttgaacggccgcatcttatc
tccattgaggatccacaggaacctacaaatgatatcgggaagaattcctacaacttttcc
caggtcagatcagcatttgcagcggcctattctacacttactgatgcaaggaccttggca
gccttgggacctaaaagaagtatcttgggactgatcataaggccggatccaacactgtta
gaacgaaaggctggggtgaatggtgaactcacatttgatgccttgtttcctggagcaggt
gatccagtggaaagggaaagaaatggacgtaaaatgctgtttaattggcaatcagacgga
agtgatgatgcacttcctagaaacagaaaaggagacaagttggagcaatccctacagaaa
tccatcaaaaagaagaaactgcggaaaagaaagggagaggatggtgttgttgcatcttcc
aaatccaagcacagacgaaggaagggagaggattttgcaaaggagagtccaaaaaagata
acgcattctaaggcagaaagagaagggggcagtgtgaagaagaagaggaaaacgaagcag
ctggagggttatgaaagtggacccaaggatcggtcaagggacagatacagaggtggagct
cggtcatgggctccttactag
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