KEGG   Nymphaea colorata (blue-petal water lily): 116263181
Entry
116263181         CDS       T07418                                 
Name
(RefSeq) flowering time control protein FY
  KO
K15542  polyadenylation factor subunit 2
Organism
ncol  Nymphaea colorata (blue-petal water lily)
Pathway
ncol03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ncol00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    116263181
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncol03019]
    116263181
Messenger RNA biogenesis [BR:ncol03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     116263181
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st ANAPC4_WD40 DSE1_N Beta-prop_WDR90_POC16_2nd ASA1 Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_RIG_2nd CFAP251_N Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st eIF2A Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_SPT8 NBCH_WD40 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_Vps41 Pep3_Vps18 Beta-prop_HPS5 PAC11 WD_LRWD1 Tricorn_2nd PEP5_VPS11_N Beta-prop_RIG_1st WD40_like Beta-prop_DCAF12 WDR54 Beta-prop_WDR11_2nd Nucleoporin_N
Other DBs
NCBI-GeneID: 116263181
NCBI-ProteinID: XP_031498669
LinkDB
Position
1:complement(41299877..41316312)
AA seq 765 aa
MMYGDQQQQQQQQQPPPPPLPHMHPQHQPGGDFHRGMPMRPPMPLMGHGPVHGDYMHGNA
PLPYDAHGDGFAAKRIRKLVHRRSVDYTSTVVRYMQCRMWQRDIRDRTALQPTPAAAIDL
LPPIAYLDNPATSFATKFVHASTNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFN
FEMILQAHDQAIRSMVWSHNENWMVTGDDGGSIKYWQTNMNNVKANKSAHRESVRDLSFS
RTDLKFCSCSDDTTVKVWDFARCQEERSLAGHGWDVKSVDWHPTKSLLVSGGKDNLVKLW
DAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTAGKDQIIKLYDIRAMKELESFRGHRKDV
TALAWHPFHEEYFVSGSFDGSIFHWVVGHETPQVELHNAHENSVWDLAWHPVGYLLCSGS
NDHTTKFWCRNRPGDPSRDKHNIGSGELGAAAPGRFAGNFPVPDAPPTPGPFAAGLARSD
GTIPGVGTAMPFAMLPLDGSDQGEQRHPIPVSNPMLAPHPPSVPHPSLLQPTQQGYPQVP
QQIPGQHQHQPLQPPMMPLPPTTLSQLQPPSQLPLLAHPSHLSRPPPIQFPSLSVPASTP
SNALSMSMQSMSVSLPLPMPGSASDSVLPRPTSLQSNNYPPVLAMPGQGLHSSATQIPQL
PQPPLGMNQIIAGPMAGSSVPPAISNFSSGMTNTHVTSSTAAGQAFAVSGVFSRPQSGQL
APVPGINAYQTGIPSMMDMRPASMALPPNISLPPGPPPHSRGSTS
NT seq 2298 nt   +upstreamnt  +downstreamnt
atgatgtacggggaccagcagcagcagcagcagcaacagcagccgccgcctccgccactg
ccacacatgcatccgcagcatcagcccggtggcgattttcaccgcgggatgcctatgagg
ccgccgatgccgctgatgggccatgggccggttcatggggattatatgcatgggaatgct
ccgctcccgtacgatgcacatggggatgggtttgctgcaaaaagaattaggaagcttgtg
catcgccgatctgttgactatacaagtactgttgttcgatacatgcagtgtcgaatgtgg
cagcgggatataagagatcgaactgcattgcagcctactcctgctgcagccatagatttg
ttgccaccaattgcataccttgataatcctgccacaagttttgcaactaaatttgtccat
gcatctacaaacaaaaatcgttgctcaatcaaccgtgtcttgtggacacctacagggagg
cgccttatcacaggctctcaaagtggggaatttactctttggaatggccagtcctttaat
tttgagatgatcttgcaggcacatgaccaagcaatcagatccatggtgtggagccacaat
gaaaattggatggtcactggtgatgatggtggatcaatcaagtattggcagacaaacatg
aataatgtgaaggcaaataaaagtgcacatagggaatctgttcgtgatttgagtttttca
agaacagatttgaaattctgctcctgttctgatgataccactgtcaaagtatgggatttt
gctcgttgccaagaagaaaggtcacttgcaggtcatggatgggatgtgaagagtgttgat
tggcacccaacaaagtccttgcttgtttctggtggaaaagacaaccttgtgaaactttgg
gatgcaaaaacagggagagaactctgttcttttcatggacacaagaacactgtgctttgt
gtcaaatggaatcaaaatggaaattgggtgcttacagctggaaaagaccagatcattaag
ctttatgatataagggccatgaaggagcttgaatctttccgtgggcatcgtaaagatgtg
acagctttggcatggcatcccttccacgaggagtattttgtgagtggaagttttgatggc
tccatcttccattgggttgtggggcatgaaacacctcaagttgaattacataatgcacat
gaaaatagtgtctgggaccttgcgtggcatcctgttggctatctcctttgcagtggtagc
aatgaccacacaaccaagttttggtgtcggaataggcctggagatccttctcgtgacaaa
cataacattggttctggagaactaggtgcagcagcacctggtcgttttgctggtaatttc
ccagttcctgatgccccacctactccaggaccgtttgcagctgggcttgctcgaagtgat
ggaacaattcctggtgttgggactgcaatgccctttgcaatgttgccccttgatggatca
gatcaaggagaacaaaggcatccaattccggtatcaaaccccatgttagcaccgcatcct
ccatctgtacctcacccatcacttttacaacctacccaacaaggatacccacaagttcct
caacagataccaggacaacaccagcatcaaccgcttcaaccacctatgatgcctctacct
ccgacaacattgtctcagttgcagcctccttcacaattaccattgcttgctcatccttct
catttatctcgtcctccacccatccaatttccttctctgtcagtgcctgcaagcactcca
tctaatgcactatccatgtccatgcaatcaatgtcagtctcacttccactaccaatgcct
gggtcagcttctgattctgtgttaccccggccaacatctttgcagtcaaacaattaccca
cctgttcttgctatgcctggacaaggactgcacagttcagccactcagattcctcaattg
ccacagccacctcttggcatgaatcaaattattgcaggcccaatggctggtagtagtgtt
ccacctgcaattagtaatttttcaagtggaatgacgaatacacatgttacatcaagcact
gctgcagggcaggcatttgctgttagtggtgttttcagccgaccacaatctgggcaactg
gcacctgttccagggattaacgcctaccagacaggaattccaagcatgatggacatgcgc
ccagccagcatggctcttcctccaaacatcagccttcctcctggcccaccacctcattca
cgtggatcaacatcataa

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