Nymphaea colorata (blue-petal water lily): 116266264
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Entry
116266264 CDS
T07418
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00040
Pentose and glucuronate interconversions
ncol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116266264
Enzymes [BR:
ncol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116266264
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
116266264
NCBI-ProteinID:
XP_031503271
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Position
12:complement(20686803..20688656)
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AA seq
318 aa
AA seq
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MTGNSGQKIQEYVVTTPADDPINPQPGSLRYGAALGHRWITFQRDMVINLRMPLLVSSFT
TIDGRGVNVQIAHGSGILLRDVSNVVVHGLRIHHCVTSNPGPVLGPGMKIVQLGKSDGDA
IAMSGSSKIWIDHNTLYACQDGLIDVTRGSTAITISNNWLRNHVKVMLLGHDDRFSEDKS
MRVTVAFNRFGPKCYQRMPRVRHGYAHVVNNYYQNWVLYAIGGSAEPTIRSEGNLFIAPR
SDNKEVTRRMNSGANMNPGNWVSVNDVLSNGAYFTQSGKGAALPGYKPEEMFPAVGGHAV
SSITRNAGALRCLPGYPC
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaccggaaattccgggcaaaagatccaggaatatgtggtgactactccggcagacgac
ccgatcaacccgcagccggggagtttgcggtacggagctgctttgggacatagatggatc
actttccaaagggacatggtgatcaaccttcggatgccgttgcttgtgagtagcttcaca
acgatcgacggccgtggtgtgaacgttcagattgcgcatggatctggaatattgcttcga
gatgtgagcaatgtcgtcgtgcatgggctgcggatccaccattgtgttacatcaaatccg
ggcccagttttaggcccaggtatgaagatagttcaactcggaaaatctgatggggatgcg
attgcgatgtccgggagttcgaagatctggatcgatcacaacactttgtacgcgtgtcaa
gatggattgatagatgtgacacgtggatcgacggcgataacaatttcgaacaattggctc
cgaaaccatgtgaaggtgatgctattgggccatgacgataggttcagtgaggacaaatcc
atgagagtcactgttgcattcaaccgcttcggcccaaaatgctaccaaaggatgccaagg
gttcgccatggatatgcacatgttgtgaacaattactatcagaactgggtgctttatgct
attggaggaagcgcagagcctacgataagaagtgaaggcaatctcttcattgcaccaaga
tcagataacaaagaggtgacgcggcgcatgaacagcggcgcgaacatgaatccagggaat
tgggtatcagtgaatgatgttttgtctaatggagcctacttcacacagagtggcaaagga
gctgcactgcctggatacaagccggaggagatgttcccggccgtcggcggacacgcagtt
tcgtccataaccagaaacgccggcgcgctccgctgcctgccgggatatccatgctga
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