Nymphaea colorata (blue-petal water lily): 116266633
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Entry
116266633 CDS
T07418
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-1-like isoform X1
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncol03016
]
116266633
Enzymes [BR:
ncol01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
116266633
Transfer RNA biogenesis [BR:
ncol03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
116266633
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
116266633
NCBI-ProteinID:
XP_031503795
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All DBs
Position
1:27524973..27526942
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AA seq
309 aa
AA seq
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MRWILCRPPPLCCVKVGKTKSQQREFHCGDLCCSKPSSSPSRRLLTMRPRWKGKGSAQLA
LADPMSKIVSKLQSCLTESKSCASLSNEVVLCEAEPEQAELLNRACFGRPMATVAKGRQW
FQLGLEEAFYLSNALNCLTVVGEDGSPKDPQKLAKCMKDRQSMFPMMYKAYSHLRMKNWV
VRPGSQYGVDFVVYRHHPALVHSEYAALVVWDGDDEFGKARMRVWSDWHCMLRLCGSVAK
SLLVLSISGVNSSNEFPACLDEWTIEEYTIGRWEAQQHREDEVPLKVENKCRTSSCDSNA
FPDQIKQNE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagatggattctgtgtagacctccccctctttgctgcgtgaaagtgggaaagacgaag
tcacagcagcgggagttccattgcggcgacctctgctgctcgaaaccctcttcatctccc
agtcgcaggttgttgaccatgagaccaagatggaaaggcaaaggttcggcacaacttgcc
cttgctgatcccatgtccaaaattgtttcaaagttgcaaagctgcttgacggaatccaaa
agctgtgcatcactgagcaatgaagttgttctttgtgaagccgaaccagaacaggcagaa
ctgctgaaccgggcatgctttggccgtccaatggcaacagttgcaaaagggaggcagtgg
tttcagttgggactagaagaggctttctatctgagtaatgcactcaactgtcttacagtt
gtcggagaagatggaagtcctaaagatcctcaaaaacttgcaaaatgtatgaaagatagg
cagagcatgtttccaatgatgtacaaggcatattcacatctcaggatgaagaactgggtc
gtgcgcccgggctcacaatatggtgttgactttgttgtgtatcgtcaccaccctgctctt
gttcattctgagtatgcggctctggtggtctgggatggtgatgatgaattcggcaaagct
aggatgcgagtgtggtctgactggcattgtatgcttagactttgtggcagtgttgctaag
tcactgttggtgcttagcatatctggtgtgaatagttccaatgagtttcctgcttgtttg
gatgagtggactattgaagagtatacaatagggaggtgggaggcccagcagcatcgagag
gatgaagttcctcttaaggttgaaaataaatgtaggacttcctcttgtgattccaatgct
tttcctgatcagattaaacaaaacgaatga
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