Neurospora crassa: NCU02717
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Entry
NCU02717 CDS
T01034
Name
(RefSeq) pre-mRNA-splicing factor clf-1
KO
K12869
crooked neck
Organism
ncr
Neurospora crassa
Pathway
ncr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCU02717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncr03041
]
NCU02717
03036 Chromosome and associated proteins [BR:
ncr03036
]
NCU02717
Spliceosome [BR:
ncr03041
]
Complex B
Other components
Prp19-related factors
NCU02717
Complex C
NCU02717
Chromosome and associated proteins [BR:
ncr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
NCU02717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_PRP39_N
HAT
Suf
TPR_19
TPR_CcmH_CycH
TPR_16
TPR_6
TPR_15
TPR_12
UTP6_C
TPR_2
HAT_Syf1_M
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
3881267
NCBI-ProteinID:
XP_965102
UniProt:
Q7SGD2
LinkDB
All DBs
Position
I:3301268..3303735
Genome browser
AA seq
695 aa
AA seq
DB search
MESSRGPPRVKNKAPAPVQISAEQLLREAVDRQEVNLQTPTQRFADLEELKEYQGRKRKE
FEDYVRRNRVRLSNWLQYAQWELEQKEFARARSVFERALDVHPNNTQLWIRYVQAEIKNR
NINHARNLLDRAVTRLPRVTSLWYQYLYVMEMLGDIPGTRQVFDRWMKWQPDEQAWSAYI
RLEKRYGEFDRAREIFRAFTAVHPEPRTWLKWAKFEEEYGTSDTVREVFQTAIQTIAETL
GDDAVDERIFIAFARYEARLREYERARAIYKFGLDNLPRSKSMTLHAHYTTFEKQFGDKE
GVEDVILTKRRRLYEEQVKENAKNYDVWFDFARLEESGGDVDRTREVYERAIAQVPPTQE
KRHWRRYIFLFLFYAIWEERETKDIGRARQIYDTCLNLIPHKKFTFAKVWVAKAHFEIRQ
GQLTTARKTLGRAIGMCPKDKIFKEYILLEQKLYEFERCRTLYEKHVMYNPANCQTWIKW
AELERGLDDLERTRAIFELAVSQPILDMPEVVWKAYIDFEEEEGEYERTRALYERLLEKA
DHPKVWISYAQFEINIPDEAEEEEETEEEVEEKPVSEEAKARARKIFERAHKSMKERELK
AERVSLLNAWLAFEKTHGSAEDIEKIQKQMPRKTKKKRKLEDDTWEEYVDYIFPADDQQT
KNLSSLLAMANAWKQQAAGGAGGAAVDEAAQGGSS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagtcatcgcgcggcccgccacgggtgaagaataaagcccctgcgcctgtacagatc
tcggccgagcagctgctgcgcgaggccgtcgaccgccaggaagtcaacctccagaccccg
acacagcgctttgccgacctcgaggagctcaaggaataccaaggtcgtaagcgcaaggag
tttgaggactacgtgcggcgtaaccgagttcgtctatcgaactggctccagtatgctcaa
tgggagctagaacagaaggagtttgcgcgggctcgctctgtgttcgagcgcgctctggat
gtacatcccaacaatactcaactctggatccgatacgttcaagcagagatcaagaaccgt
aacatcaaccatgcacgcaatctgttggaccgcgctgtcacgcggctgcccagagtcaca
tctctctggtaccagtatctctacgttatggagatgctcggcgacattccgggtaccaga
caagtcttcgaccggtggatgaagtggcagccagatgagcaggcgtggagtgcttatatc
cgtctagagaaacgttacggcgagttcgacagggcaagggagatcttcagggcctttacc
gccgtccatccggaaccgaggacgtggctcaagtgggccaagtttgaagaggaatacggg
accagcgacacggtccgcgaggtcttccagacagctatccagacaattgccgaaacgcta
ggcgacgatgccgttgacgagaggatattcatcgccttcgcccggtacgaggcccgtctg
cgtgagtatgagcgggcccgtgccatctacaagtttggcctcgacaacttgcctcggtcc
aagtcgatgacgctacatgcccactacaccacatttgaaaagcagtttggcgacaaggag
ggtgtggaggacgtcattcttacaaagaggaggagattgtacgaggagcaagtcaaggag
aacgcaaagaactacgacgtctggtttgactttgcgcgactcgaggagagcggaggagat
gtcgatcggaccagagaagtctacgagcgagccattgctcaagtaccgccaacccaagag
aagcgacactggaggcggtacattttcctcttcctcttttacgcgatatgggaggagagg
gaaacaaaggatatcgggcgagcccgtcagatctacgacacctgtctgaacctgatcccc
cacaagaagttcacttttgccaaagtgtgggttgccaaggcgcacttcgagatccgacag
ggccaactaacgacggcccgcaaaaccctcggccgcgccatcggcatgtgccccaaagac
aagatcttcaaggagtacatcctcctcgagcagaagctctacgagttcgagcgctgccgc
accctctacgaaaagcatgtcatgtacaacccggccaactgccaaacatggatcaagtgg
gccgagctggaacgtggtctcgacgatctcgagcgcacccgcgccatcttcgagctcgct
gtctcgcagccgatcctggacatgcccgaggtggtatggaaggcgtacatcgatttcgag
gaagaagagggcgagtacgagcggacgcgtgccctgtacgagcgcctgctcgagaaggcc
gatcaccccaaggtctggatcagttacgcccagttcgagatcaacatacccgacgaggcc
gaggaggaggaagaaacggaggaggaggtggaagagaagcctgttagcgaagaggccaag
gcacgtgctcgcaagatctttgagagggcgcacaagagcatgaaggagcgcgagctcaag
gccgagcgtgtgtcgctgctcaacgcgtggttggcgtttgagaagacgcatgggtcggcg
gaggatatcgaaaagattcagaaacaaatgcctaggaagaccaagaagaagcgtaagctg
gaggatgatacttgggaggaatatgtcgattatatcttcccggctgatgatcagcagacc
aagaacttgtcgagtctgttggccatggcgaatgcttggaaacagcaggccgcggggggt
gctggtggcgctgctgtcgatgaagcggctcagggagggagcagctag
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integrated database retrieval system
