KEGG   Neurospora crassa: NCU06994
Entry
NCU06994          CDS       T01034                                 
Name
(RefSeq) pre-mRNA-splicing factor cef-1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ncr  Neurospora crassa
Pathway
ncr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NCU06994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ncr03041]
    NCU06994
   03400 DNA repair and recombination proteins [BR:ncr03400]
    NCU06994
Spliceosome [BR:ncr03041]
 Complex B
  Other components
   Prp19 complex
    NCU06994
 Complex C
   Prp19-CDC5 complex
    NCU06994
DNA repair and recombination proteins [BR:ncr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    NCU06994
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 Rap1_C TPR_HPS5_insect
Other DBs
NCBI-GeneID: 3878772
NCBI-ProteinID: XP_962634
UniProt: Q7SAF6
LinkDB
Position
IV:4816846..4819667
AA seq 779 aa
MPVVKGGVWTNIEDEILKASVSKYGLNQWARVSSLLARKTPKQCKARWNEWLDPSIKKIE
WSKEEDEKLLHLAKLMPTQWRTIAPIVGRTANQCLERYQRLLDEAEQREASALGLTGPDG
GEAHAPSADDVRKLRPGEVDPDPETKPARPDTIDLDEDEKEMLSEARARLANTQGKKAKR
KARERQQEESRRLAALQKRRELKTAGINIKVTTKKQGQMDYNADIPFEKKPVPGFYDTTE
EMSRNEYQRAHFDPKKQQVGNKRKGEEDERDGKRRKGDKDPSVQAALKAGQLQKMREAEQ
SSKRRALVLPAPQVGEGELEEIVKMGMIGERANMLARESDNDATRGLINNYSTLNTNAPI
RTPMAPAQEDHIANEIRNIRALTETQSSLLGGENTPLHQGVGSTGFESVAPRKQVMSTPN
PLATPLRAAGAGPGATPLRVGQTPLRTPRDTFALNDAGDEMSMVGGTPRDVKMREMSIRH
QLKQGLASLPKPKETEWELELPDDQQEPKTAEQLEEDAAERDRREREIREARELLERKRR
TQVMQRDLPRPVQVDYQSLLKEASQAEDPVKVLIAREAALLVAHDATKYPLPGAQPTGRA
LEIQKIDDAALQEAKLQVLMEIKDKPKPEEVQAVWEKSNSSSLLLGLGCYEDDEEEEQIS
TMQIALEEVIDQIVASAEKGNKLEKKLNLHLGGYKNRAEMLRKKISEAHEALEKANNALG
AFKVLQSSEQAAIRNRLAALREEVGFVSTREREAQELYRRTREELDALTLNGPKANGFR
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgcccgtcgtcaagggaggtgtgtggaccaacatcgaggatgaaatcctcaaggcgtcg
gtcagcaagtacggcctgaaccagtgggcccgcgtctcgtcgctgctggcccgcaagacg
cccaagcagtgcaaggcaagatggaacgaatggctggatcccagcatcaagaagatcgaa
tggagcaaggaggaggatgagaagctgctgcacctcgccaagctgatgccgacccaatgg
cgtaccattgcccccatcgttggaagaaccgcaaaccagtgcctggaaagataccaaaga
cttctcgacgaagctgagcagagggaggcgtccgctcttgggctgacgggccctgatgga
ggcgaagctcacgcgcccagcgccgacgatgttcgcaaactacgtcctggcgaggtcgac
cccgatccggagacgaaacccgcccgtcccgacaccatcgatctcgatgaagatgagaaa
gaaatgttgagcgaggctcgcgcgcgtctggccaacacacagggtaaaaaggccaagcga
aaggcccgtgagcgacagcaggaggagtcacgccgactggccgctctccagaagcgtcgc
gagttgaagacagccggtatcaacatcaaggttacgacaaagaagcagggccagatggac
tacaatgccgatattccattcgaaaagaagcctgttcccggattctatgacaccaccgag
gagatgtctcgcaacgagtaccagcgcgcccatttcgaccccaagaagcagcaggttggg
aacaagcgcaagggtgaagaggacgagagagacggcaagaggagaaagggcgacaaggac
ccatctgtgcaagccgccctcaaggccggtcaactgcagaagatgcgcgaggcagaacag
agcagcaagcggagggctttggtcctgccagcacctcaggtcggcgaaggcgagttggag
gaaattgtgaagatgggcatgattggcgaacgggcaaatatgctggctcgcgaaagcgac
aacgacgcaactcgtggcctgatcaacaactactcgacactcaacaccaatgcgccaatc
cgaacaccgatggcccccgctcaggaagaccacatcgcaaacgagatccgcaacatccga
gcactaacagagacgcaatcctcgctgctcggtggagagaacacacctctacaccagggg
gtgggctctaccggcttcgagtcggttgcgccgcggaagcaggtcatgtcaacccctaac
cccttagccacccctttgcgggcagctggagctggtcctggcgccacgcccctccgcgtc
ggccaaacaccactgcgcactccccgtgatacatttgctctcaatgatgccggtgacgaa
atgtccatggtgggcggcacaccccgagatgttaagatgcgcgagatgtctattcggcac
cagctcaagcaaggcctcgcgtctcttcccaagcccaaagagaccgagtgggagctcgag
ctgccggacgatcagcaagagcccaagaccgctgagcagctggaggaggatgctgctgaa
cgtgatcgacgagaaagggagatcagggaggcgcgagagctgttggagcgcaagagacgt
acccaggtcatgcagcgggatctgcctcggcctgtccaagtcgattatcagtcactcttg
aaggaagcctcgcaggccgaggaccctgtcaaggttctcatcgctcgtgaagcggccttg
ctcgtagctcatgatgccaccaagtatcctctaccgggagctcagccaactggccgggca
ctggagatccagaaaatcgacgacgccgcgttgcaagaggccaagcttcaggttctgatg
gaaatcaaggataaaccaaagccggaagaagttcaagcggtgtgggaaaagagcaacagc
agctcccttttgcttgggctgggatgctatgaggacgatgaagaagaagagcagatttcc
actatgcaaattgcgcttgaggaggtcattgaccaaatcgtcgcctcggcagagaagggc
aacaagctcgagaagaagctcaacctgcatcttggcggttacaagaatcgggctgaaatg
ctgcggaagaagatcagtgaggctcacgaggcgttggagaaggcgaacaacgctctgggc
gctttcaaggtcctccagtcctcggagcaggccgctattcggaaccggctggcggcgctg
cgtgaggaggtgggctttgtgagcacgagggagagagaggcgcaggagttatacaggagg
acgagggaagagctggatgctttgacgctcaacgggccgaaggccaatgggttccgctga

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