KEGG   Naumovozyma castellii: NCAS_0D03490
Entry
NCAS_0D03490      CDS       T02233                                 
Symbol
NCAS0D03490
Name
(RefSeq) uncharacterized protein
  KO
K14299  nucleoporin SEH1
Organism
ncs  Naumovozyma castellii
Pathway
ncs03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ncs00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    NCAS_0D03490 (NCAS0D03490)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncs03019]
    NCAS_0D03490 (NCAS0D03490)
   04131 Membrane trafficking [BR:ncs04131]
    NCAS_0D03490 (NCAS0D03490)
Messenger RNA biogenesis [BR:ncs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     NCAS_0D03490 (NCAS0D03490)
Membrane trafficking [BR:ncs04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    NCAS_0D03490 (NCAS0D03490)
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_EML_2 ANAPC4_WD40 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st Rav1p_C
Other DBs
NCBI-GeneID: 96903536
NCBI-ProteinID: XP_003676291
UniProt: G0VED9
LinkDB
Position
4:650325..651362
AA seq 345 aa
MAGMKPFNSGHEDLIHDVVYDFYGRHVATCSSDQHIKVFKLDKETSEWELSDSWKAHDSS
IVSVDWASPEYGRIIVSASYDKTVKLWEEDPDQPEGSGRRWTKLCTLNDSKGSLYTVKFA
PPHLGLKLACIGNDATLRIYEALEPSDLRSWTLTSEVKVLPVPPANHLQSDFCIAWCPSR
FSPEKLVVSTLDQASIYQRGKDGKLYIVAKLNGHKGLIRDISWAPSIGRWYHLIATGCKD
GKLRIFRLVEKLSDNSSKDAINDSYDDEDVDMEDIAENKEKSLLGSSVSVELLSEHDDHN
AEIWSVSWNLTGTILSSAGDDGKVRLWKSTYSNEFKCMSVITSNS
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggcaggaatgaaaccatttaatagtggtcatgaagacctaattcatgatgtcgtatac
gatttttacggaagacatgtcgccacatgctcatctgaccaacatataaaagttttcaaa
cttgacaaagagactagtgaatgggaattgagtgattcctggaaggctcatgatagcagt
atagtctcagtggattgggctagtcccgaatacggacgcattattgtgtccgcatcatat
gataaaaccgtgaaattatgggaggaagacccagatcaaccggagggttcaggccgtcgt
tggactaaattgtgcactttgaatgattctaaaggatctctatacactgtaaaatttgct
cctccacatttaggtctgaaattagcttgcattggtaatgatgcaaccttaagaatatac
gaggcattggaaccttctgatctaagatcttggacattgacatcagaagtaaaagttttg
ccagtaccacctgctaaccacttgcaatcagatttttgcatagcatggtgtccatccagg
ttttcacccgagaagcttgtggtttctacattagatcaagcttcgatttaccaaagaggt
aaagatgggaagttatacattgttgccaaactaaatggccataagggtttgataagagat
ataagttgggctccatctattggaagatggtatcatttaattgctaccggttgtaaagat
ggaaaacttcgtatcttcagacttgtagagaaattatctgacaattcatcaaaggacgca
atcaatgatagttatgatgacgaagacgttgatatggaggatattgcagagaataaagaa
aaatcactacttggttcttcagtaagcgtagagttattaagtgaacacgatgatcacaat
gccgaaatttggtcagtgtcctggaacttaacgggaaccatcttaagtagtgctggcgat
gatggcaaagtaagattgtggaaatctacatactctaatgaatttaagtgcatgtcagtg
atcacatcaaattcttag

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