Candidatus Nitrosomarinus catalinensis: NMSP_0866
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Entry
NMSP_0866 CDS
T04846
Symbol
prf1_1
Name
(GenBank) Peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
nct
Candidatus Nitrosomarinus catalinensis
Pathway
nct03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NMSP_0866 (prf1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nct03019
]
NMSP_0866 (prf1_1)
03012 Translation factors [BR:
nct03012
]
NMSP_0866 (prf1_1)
Messenger RNA biogenesis [BR:
nct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
NMSP_0866 (prf1_1)
Translation factors [BR:
nct03012
]
Eukaryotic type
Release factors
NMSP_0866 (prf1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_1
eRF1_3
acVLRF1
baeRF_family10
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ARS64485
UniProt:
A0A2Z2HL95
LinkDB
All DBs
Position
686816..688096
Genome browser
AA seq
426 aa
AA seq
DB search
MVKINIEKQDSVKLYKIRKTLEELSKKSGRGTELITVYIPKGKQLHEIIGSLQQEQGTAD
NIKSDLTRSHVVDSLGKVVSKLKMYKKTPEKGLVVFCGALPPEEGGPLGSEVVTAWEIEP
PKDLNQYLYRCDDHFHVDILKDMLKDDNLIGFLSIDAKDAGWGLLHGDKIEVLSQTGSGV
AGKHRQGGQSAKRFQKLREMELSYFYNRVAQTTREYFIDIYPVKGLIISGPGPTKEDFIN
GNYLEYRLQNNIINTIDASYSGAEGIREAFAKSGDILGNFRLVEEKKLVEDLFREINTNT
GKGSYGLQEVIEFLKNNVVQILLITDNTNLHRVEAECKRCKKIQEEIVERQLVIPKKTEY
KNNPCPDCKAMDTEVNEQDIVDYLQILAAKTGTQLEVISGSAEHGNMLGSLGKIGAILRY
NPGHTK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaatcaacatagaaaaacaagattcagttaaactctataaaattagaaagacc
ttagaagaattatctaaaaaatcaggtagaggaacagaattaattacagtatacatacca
aaaggaaaacaacttcacgaaattattggatcattacaacaagaacaaggtactgccgat
aacataaaatcagatttaacaagatctcacgtggtagattctcttggcaaagtagtttca
aaattaaaaatgtacaaaaaaacgcctgaaaaaggattggtggttttttgtggtgcatta
ccacctgaagaagggggacctcttggaagtgaagtagttacagcatgggagattgagcct
ccaaaagatttgaatcaatatctttacagatgtgatgaccattttcatgttgatatccta
aaagatatgctaaaagatgataatctgattggatttttgtccatagatgcaaaggatgca
ggctggggattattacatggagataaaattgaagttttatcacaaacaggttcaggagtt
gcaggaaaacacagacaagggggacaatctgcaaaaagatttcaaaaattgagagaaatg
gaattaagttacttctacaatcgagttgcacaaactacaagagaatattttatcgatatt
tatccagtaaaaggattaattatttctggacctggtccaacaaaagaagatttcattaat
ggaaattatctagaatacagattacaaaataatattatcaataccattgatgcaagttat
tcaggagctgaaggcattagagaagcatttgccaaatctggagacattttgggtaatttt
agattagttgaagaaaaaaaattagttgaagatctatttagagaaattaatacaaatacg
ggcaagggttcatacggattacaagaagtaattgagtttctaaaaaataatgttgttcaa
attttactgattacagacaatacaaatctgcacagagtggaagcagaatgcaaacgttgt
aaaaaaattcaagaagaaattgtagaaagacaattagtcattccaaaaaaaacagaatac
aaaaacaatccatgtccagattgtaaagcaatggatacagaagttaatgaacaagatatt
gtagattatttacaaattcttgcagcaaaaacaggaacacagttagaagttatttcaggt
agtgcagaacatggtaatatgttgggaagtctaggaaaaattggagcaatcctgagatat
aatccaggtcacactaagtaa
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