Candidatus Nitrosomarinus catalinensis: NMSP_1709
Help
Entry
NMSP_1709 CDS
T04846
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nct
Candidatus Nitrosomarinus catalinensis
Pathway
nct00260
Glycine, serine and threonine metabolism
nct00630
Glyoxylate and dicarboxylate metabolism
nct00670
One carbon pool by folate
nct00680
Methane metabolism
nct01100
Metabolic pathways
nct01110
Biosynthesis of secondary metabolites
nct01120
Microbial metabolism in diverse environments
nct01200
Carbon metabolism
nct01230
Biosynthesis of amino acids
nct01240
Biosynthesis of cofactors
nct04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NMSP_1709 (glyA)
09102 Energy metabolism
00680 Methane metabolism
NMSP_1709 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NMSP_1709 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NMSP_1709 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NMSP_1709 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NMSP_1709 (glyA)
Enzymes [BR:
nct01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NMSP_1709 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
SelA
Pyridoxal_deC
Ino80_Iec3
Motif
Other DBs
NCBI-ProteinID:
ARS65306
UniProt:
A0A2Z2HT19
LinkDB
All DBs
Position
1352397..1353719
Genome browser
AA seq
440 aa
AA seq
DB search
MVKSQNKESYNKIFAKLKEHHKWFENSIPLIASENIPSPAVREAIISDFGNRYAEGWPGD
RVYAGCIYIDDVEVECMKLAKKLYKAKFADVRPISGVVANLAVYSAYSNPGDVMIAPSIP
AGGHISHGKKEHSGTAGLVHGLEIEFYPFNAEDMTIDVDKTKQKVKELKKNNRLPKMAMF
GGSLFLFPHPVKELSDFLKTYDIHINYDAAHVAGLIAGGKFQDPMREGADTMTMSTHKTL
FGPQGGLVLGSEEHEEPIKKATFPGLTSSHHINNMAGKAVAFAEALEFGKDYAAQVIKNA
KIFAEALNDAGFKVLGESRGYTQSHQIAVNVLDYSDGGKVEAELEKANIIVNRQLIPGDI
KAGRNYFHPGGIRLGVSEITRLGMKENEMKEIATFIKQIIIEKKDPKKVLPKVKSWRKDY
QKVKYCFDSKLGAYEYVKLR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagtctcaaaataaagaatcttacaataaaatatttgcaaaattaaaagagcat
cataaatggtttgaaaactcaattccattaattgctagtgaaaatattcctagtcctgct
gtaagagaggcaattatttctgattttggcaatagatatgcagaaggttggcctggagat
agagtgtatgctggatgtatctacattgatgacgtagaagtagaatgtatgaaattagct
aaaaaattgtataaagcaaaatttgcagatgtgagacctatttctggagtcgttgcaaat
ttagcagtatattcagcttattcaaatccaggagatgtaatgattgctccatctattcct
gctggcggacatatttcacatggtaaaaaagaacattctggtactgcaggacttgtccac
ggtttagaaattgaattttatccatttaatgctgaagatatgacaattgatgttgataaa
actaaacaaaaagtaaaagaattgaaaaagaataatcgtcttccaaaaatggcaatgttt
ggtggttcattatttttattcccacatccggtaaaggagttatcagattttcttaaaaca
tatgatattcacatcaattatgatgcagctcatgttgcaggattaattgctggcggaaaa
ttccaggatccaatgcgtgaaggtgcagatacaatgactatgagtactcataagacattg
tttggaccacaaggaggattagttttaggttctgaagaacatgaagagccaattaagaaa
gcaactttcccaggattaactagtagtcaccatatcaataacatggcaggaaaagctgtt
gcatttgctgaagcattagaatttggtaaagattatgcagcacaagtaattaaaaatgcc
aaaatatttgctgaagcactaaatgatgctggattcaaagtattaggtgaaagtagagga
tatacacaatcacatcaaattgcagttaatgttttagattattctgacggcggaaaagtt
gaagctgaattagaaaaagccaacataattgtcaacagacaacttattcctggagacatt
aaggctggaagaaattatttccatccaggaggcattagattgggtgtctctgaaataaca
agattaggaatgaaggaaaatgaaatgaaagagattgccacattcattaaacaaataatt
attgagaaaaaggatccaaagaaagttcttccaaaagtaaaatcttggagaaaagattat
caaaaagtcaaatattgttttgatagtaaacttggtgcctacgaatacgtcaaattaaga
taa
DBGET
integrated database retrieval system