Neptunomonas concharum: F0U83_16375
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Entry
F0U83_16375 CDS
T06194
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ncu
Neptunomonas concharum
Pathway
ncu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F0U83_16375 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncu03400
]
F0U83_16375 (xth)
Enzymes [BR:
ncu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
F0U83_16375 (xth)
DNA repair and recombination proteins [BR:
ncu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
F0U83_16375 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QEQ98160
UniProt:
A0A5P1RET9
LinkDB
All DBs
Position
complement(3441989..3442762)
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AA seq
257 aa
AA seq
DB search
MRVITFNAQGIEQAADRGFFDWMVQQDADVICIQDLRAKEYQLDGDRYHPEGYYPYFFDA
FEDGYSGVAIYTRHLPKAIMTGLGFELCDYQGRFIQADFDKVSVASLYIPSGLKSHEAQQ
KKEEFMSHFMGHLKKTLRKRRDFIFCGTFNTAHRTEDLSNWYVNQTVSGFLPSERAFMEE
MFGELGYVDAFREINKAERQFTWWPDYNRARTLNEGARLDYQVTTANMRKMIKNVSIYKE
GMFSEHGPLIVDYDGDF
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttatcaccttcaatgcccagggtattgaacaagcagctgaccgaggcttcttt
gactggatggtccagcaggatgcagatgtaatctgcattcaggatctacgtgctaaagag
tatcagttagacggtgatcgttatcatcccgaaggatactacccttacttctttgatgcc
tttgaagatggttacagtggtgtagccatctatacacgccatctacccaaggcaattatg
accggtttgggctttgagctatgtgactaccaagggcgttttatccaagctgactttgat
aaggttagtgtggcatctttgtatattccttccgggttgaaaagccacgaagcgcagcag
aaaaaagaagagttcatgagccacttcatgggccatctgaaaaaaacactgcgtaagcgt
cgcgactttattttctgtggcacctttaacacggctcaccgcacagaagacctgagtaac
tggtatgttaaccaaacggtttctggctttctgccgagcgaacgggcatttatggaagag
atgtttggcgagctaggctatgtcgatgcgtttcgagagataaacaaagcggaacgccag
tttacctggtggcctgattacaatcgtgcacgtaccttaaacgaaggcgcacgtttggat
tatcaggtaacaacggcgaatatgcgcaaaatgattaagaatgtctctatctataaagag
ggcatgttttctgagcacggcccgctaatcgtcgattacgacggtgatttctaa
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