KEGG   Neptunomonas concharum: F0U83_16575
Entry
F0U83_16575       CDS       T06194                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ncu  Neptunomonas concharum
Pathway
ncu03420  Nucleotide excision repair
ncu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ncu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    F0U83_16575 (uvrD)
   03430 Mismatch repair
    F0U83_16575 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ncu03400]
    F0U83_16575 (uvrD)
Enzymes [BR:ncu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     F0U83_16575 (uvrD)
DNA repair and recombination proteins [BR:ncu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     F0U83_16575 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     F0U83_16575 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 AAA_12 Viral_helicase1 AAA_22 DUF2937 RWP-RK
Other DBs
NCBI-ProteinID: QEQ98195
UniProt: A0A5P1RG16
LinkDB
Position
3487501..3489708
AA seq 735 aa
MDVTAIIDGLNDAQRAAVTAPVQNLLVLAGAGSGKTRVLVHRIGWLVQTEGMSPYSIMAV
TFTNKAAREMRGRIEELLGVNPHGMWVGTFHGLAHRLLRAHWRDAGLNENFQIMDSEDQL
RLIKRLCKEMNLDENRWPARQFQWYINAQKDEGLRSRHIERTGDPYDKMMIGMYEAYEDA
CDRGGMIDFGELLLRCLELLRDHNPTLLRHYQERFRYILVDEFQDTNAIQYAWLRLMTGN
DRKLMAVGDDDQSIYGWRGARIENIQNLPEHFPGAEVIRLEQNYRSTQTILEAANAVIAN
NRGRLGKQLWTEGKDGEKISLYSAFNEQDEARFIVGQIQKWVENGSLRAESAILYRSNAQ
SRVLEEALIRSGVPYRIYGGHRFYDRLEIKNALAYLRLVSNRDDDTAMERIINVPTRGIG
TRTIEVVREQARTENIPMWRAANEVVEYKKLPARALSALQAFLDIINRIDTESTGTSLHE
LTDHAIQLSGLIEHHKKEKGDKAQSRLENLEELINAAKQFTSQWEATAEEENVTELSAFL
DQAALDAGEAQADDHQDSVQLMTLHSAKGLEFPLVFLAGMEEGLFPHSMSAEEPGRMEEE
RRLCYVGITRAMQKLFLTYAEARRMHGQDNYNRPSRFIQEIPLELVEEVRLNATVSRPMT
ARNDYSNSSNGLFNNVQQDDGTPPIYIGQRVCHPIFGEGIVLNCEGNGPKARVQVNFDSE
GMKWLVLGFAKLEPA
NT seq 2208 nt   +upstreamnt  +downstreamnt
atggacgttacagcaatcattgatggtttaaacgacgcgcaacgggctgctgtaacagca
cctgtacaaaacctcttagtattggccggtgcaggttcaggtaaaacccgcgtattggtg
catcgcatcggttggttagtacaaaccgagggtatgtcaccttattccattatggcggta
acgttcaccaacaaggccgctagagaaatgcgtggtcgtattgaagagctacttggcgtt
aacccacacggcatgtgggtcggcacctttcacgggcttgctcatcgcttgttacgtgct
cattggcgtgacgcagggcttaatgagaacttccagattatggatagcgaagaccagcta
cgcctgatcaagcgactctgcaaagagatgaatctggacgagaaccgttggcctgctcgt
cagtttcagtggtacatcaatgcacagaaagatgaagggctgcgcagccgacatatcgag
cgaaccggcgacccctacgataagatgatgatcggcatgtatgaggcctatgaagacgcc
tgtgatcgtggcggcatgatcgattttggcgagcttctacttcgttgccttgagcttttg
agagatcataatccaacattgcttcgtcactaccaggaacgttttcgctacatccttgta
gatgagttccaagataccaatgctattcagtacgcatggctacgtttaatgacgggcaat
gatcgtaaactgatggcggttggcgacgacgatcagtccatttatggctggcgtggcgcc
cgcattgaaaatatccaaaatttaccggagcacttccctggtgccgaggttattcgatta
gaacaaaactaccgctccactcaaacgattttggaagcggccaacgcggttatcgcaaac
aatcgcggacgcttgggcaaacaactctggaccgagggtaaagatggcgaaaaaatatcc
ctctactcagccttcaatgagcaagatgaagcccgctttattgtcgggcaaattcagaaa
tgggtagagaacgggagtcttcgcgcagagtcagctattctttaccgctccaatgcccaa
tcacgggtcttagaggaagcgctgatccgcagtggcgtgccttaccgcatttatggcggc
catcgtttctatgatcgccttgaaatcaagaacgcacttgcctatttacgattggtttct
aaccgcgatgatgataccgctatggaacgtattattaatgttcctactcgcggtattggc
acgcgaacgattgaagttgttcgcgaacaagccagaacagaaaatatccccatgtggcgc
gccgccaatgaagtggtagagtacaaaaaactacccgcacgtgcgctttctgcactgcag
gcgtttttagatattatcaatcggatcgataccgaatccacgggcacctcgttacacgaa
ctgacagaccatgcgattcaacttagcgggctaatcgagcaccacaagaaagagaaaggc
gacaaagctcagtcccgcctagaaaacttggaagaactgatcaacgccgccaaacagttt
actagtcagtgggaagccacggcagaagaggaaaatgttactgaactctccgcattcctt
gatcaggcagcccttgatgctggcgaagcgcaagctgatgatcatcaagacagcgtccag
ctgatgaccttacactcagccaaagggctggagttccctttggtctttttggccggaatg
gaagagggactattcccccacagcatgtcggcagaagagccggggcgtatggaagaggag
cgccgtctttgctacgtaggcatcactcgcgccatgcaaaagctgtttcttacctatgcc
gaagcacgccgtatgcatggccaagataactacaaccgtccatcgcgctttatccaagag
atacctctggaattagtggaagaggttcgtcttaacgcaacggtgagtcgaccaatgacc
gcacgcaatgactatagcaactcgtctaacggtttattcaataacgtgcagcaggacgat
ggcactccacctatctatatcgggcagcgagtgtgccacccgatcttcggtgaaggcatc
gtattaaactgcgaaggcaacggcccaaaggctcgcgtgcaagtcaactttgacagcgaa
ggtatgaaatggctggtgctgggctttgctaaactagaacccgcttag

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