Candidatus Nitrosocaldus cavascurensis: NCAV_1300
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Entry
NCAV_1300 CDS
T05329
Symbol
dpo
Name
(GenBank) DNA polymerase B1
KO
K02319
DNA polymerase, archaea type [EC:
2.7.7.7
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCAV_1300 (dpo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncv03032
]
NCAV_1300 (dpo)
Enzymes [BR:
ncv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCAV_1300 (dpo)
DNA replication proteins [BR:
ncv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
B-family DNA polymerases
NCAV_1300 (dpo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
DNA_pol_B_2
RNase_H_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-ProteinID:
SPC34467
UniProt:
A0A2K5AS58
LinkDB
All DBs
Position
NCAV:1137265..1139835
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AA seq
856 aa
AA seq
DB search
MQSTVNMSIAERIRMLCSDTYSLAPSLLVSATYDGEKRVAVLKFYNPDDDMIHVWYDKTG
HKPYCFAMDEQAVLDGIRDRKDILAIERVKKADLLNDREVDMLKIVATDPLAIGGTEKSV
RNMLRTWESDIKYYENYLYDNGLVVGLYYSIEDGVLKRHEYRVAENVDLALKKLIWDSIA
DDKASSEEFRNYLQEWAKLLNQPIPEIKRVALDIEVVSEDDRIPDANRARNEVIAVAMVG
SDDRHEIFLLNRKGNSIGSKDALDANVSVRFFDDERELLRSVFSRMLDYPFIITFNGDDF
DLPYLYNRALNLGIPRDEIPIALQRDSATVKHGVHIDLYRTFTNRSIQIYAFSHKYSEYT
LNAISEALINESKIKFEGSIGDLPLYELANYCYNDARITYRLTTFSNNLLMKLLIAVARI
AKMPIEDLSRLGVSQWIRSMLYFEHRRRNALIPRKEELEQKGHASTTAVIKDKKYRGGFV
VEPKPGVHFNVVVLDFASLYPSIIKVYNLSYETVRCVHEECKANIIPETEHWVCKKRKGI
TSLLIGSLRDLRVNYYKQLSKDKTLKAEDKELYSVISQALKVILNASYGVMGADIFPLYC
LPVAEATAAIGRYIITSTIKKCKELGIEVIYGDTDSLFLKGPSREQIESIAKWARKELGV
DLDLDKQYRYIALSERKKNYLGVLIDGNVDVKGLTGKKSHTPQFVRDAFYAVVDILSKVN
TEQDFEYAREEIRRIIKDYASRLKNRKIPLEDLAFNVMVGKAPEDYKKTMPQHIRAAQLL
QEHGKREVKAGDIISFVKTTTPPGVKPVELAKVDEIDVEKYIEYMRTTFDQILGALGYEF
DVILGASKLEDFFFTN
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtactgttaacatgagcatagcagagaggataaggatgctctgctcagatacc
tatagccttgcaccatccctgcttgtatcagcaacatacgatggtgagaagagggtagca
gtactcaagttctataatccagatgatgatatgatccatgtatggtatgataagactggg
cataagccatactgctttgctatggatgagcaagcagtattagatgggataagggatagg
aaggatatacttgctatagaacgtgttaagaaggcagatctactcaacgatagggaggtt
gatatgctgaagatagttgctacagacccccttgcaataggaggcactgagaagagtgtt
aggaatatgctaaggacatgggagtctgatataaagtactatgagaactatctatatgat
aacgggcttgtagttggtctatactactctatagaggatggggtgttgaagagacatgag
tatagagttgctgagaacgtagatctagcacttaagaagttgatatgggatagcattgca
gatgataaggcaagtagtgaggaatttaggaactaccttcaagagtgggcaaaactcctc
aaccaaccaatacctgagataaagagggtagcattggatatagaggttgtatctgaggat
gataggataccagatgcaaatagggcaagaaatgaggttatagcagttgcaatggttggg
agtgatgataggcatgagatcttcctgctcaacaggaaggggaatagcataggaagcaaa
gatgctcttgatgctaatgttagcgttagattcttcgatgatgagagagagttgcttagg
agtgtattcagtaggatgcttgattacccattcataataaccttcaacggggatgacttt
gatctaccatatctttacaatagggcattgaaccttggtataccaagggatgagatacct
atagccttgcagagggactctgcaacagtgaagcatggtgtgcatatagatctttacaga
acgtttacaaacagatccatacagatatatgcattcagccataaatactcagagtacaca
cttaatgctataagtgaagcactcatcaacgagtcaaagataaagtttgaaggcagcata
ggagatcttccattgtatgaacttgcaaactactgctataatgatgcaaggataacttac
aggttaacaacgttcagcaacaacctactcatgaaactactcatagcagttgcaaggata
gcaaagatgccaatagaggatctctctaggctaggggtgtcgcagtggataaggagtatg
ctatactttgagcataggaggaggaatgctctaatccctagaaaggaggagttggagcag
aaagggcatgcatcaacaaccgctgttataaaggataagaagtataggggaggttttgtg
gttgagccaaagcctggggttcacttcaatgttgttgttctagactttgctagcctatac
ccaagcataatcaaggtctacaacctctcttatgagacggtaagatgtgtgcatgaagag
tgtaaagcaaacataatacctgagactgagcattgggtatgcaagaagaggaaaggtata
acatcactgcttataggctctttacgtgatctaagggtgaattactacaagcagttatcc
aaggataagactctaaaggctgaggataaggagctctatagcgttataagccaagcgttg
aaggtcatcctaaacgcaagctatggggtcatgggtgcagatatcttccctctctactgc
ttaccagttgcagaggcaacagcagcaataggcagatacataataacaagtaccatcaag
aagtgcaaggaacttggcatagaggttatatatggggatactgattcgctcttcctcaaa
ggcccttcaagggagcagattgagagtatagcaaagtgggctaggaaggagttgggtgtt
gatcttgatcttgataagcagtataggtatatagcgttaagtgagaggaagaagaactac
cttggtgtgctcatagatgggaacgttgatgttaaagggttgacagggaagaagagccat
acacctcagttcgttagggatgcattctatgctgttgttgatatcctaagcaaggttaac
actgagcaggactttgagtatgctagagaggagatcaggaggataatcaaggattatgct
agtaggttgaagaacaggaagatacctcttgaggatctagcattcaacgttatggttggt
aaggcaccagaggattacaagaagaccatgcctcagcatataagggctgcacaactacta
caagagcatgggaagagagaggttaaggctggagatataatctcatttgtgaagacaaca
actcctccaggtgtgaaacctgtagaacttgcaaaggttgatgagatcgatgttgagaag
tacatagagtatatgagaacaacattcgatcagatacttggtgcattgggctatgagttc
gatgtgatccttggtgcatcgaagttagaggacttcttctttacaaactga
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