Candidatus Nitrosocaldus cavascurensis: NCAV_1331
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Entry
NCAV_1331 CDS
T05329
Symbol
srp
Name
(GenBank) Signal recognition particle 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv02024
Quorum sensing
ncv03060
Protein export
ncv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NCAV_1331 (srp)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCAV_1331 (srp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCAV_1331 (srp)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ncv02044
]
NCAV_1331 (srp)
Enzymes [BR:
ncv01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NCAV_1331 (srp)
Secretion system [BR:
ncv02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NCAV_1331 (srp)
Eukaryotic Sec-SRP protein
NCAV_1331 (srp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
KduI
CbiA
nSTAND3
ParA
PduV-EutP
MobB
AAA_26
MMR_HSR1
Zeta_toxin
cobW
LpxK
APS_kinase
AAA_16
AAA_17
RNA_helicase
KTI12
ArsA_ATPase
Thymidylate_kin
AAA_33
AAA_30
6PF2K
DUF7527
Motif
Other DBs
NCBI-ProteinID:
SPC34497
UniProt:
A0A2K5AS84
LinkDB
All DBs
Position
NCAV:complement(1162199..1163542)
Genome browser
AA seq
447 aa
AA seq
DB search
MVLDNLKQGLRATLKKLVGASSIDENIIKELARDVQRSLLQADVNVRLVLELTNRLQERA
LKEQPPPGLSRKDHIVKILYEELSRLLGGGDEVGLALRKDKSNIVLMVGIEGSGKTSATA
KLAKWLLKHGYSVGVIGTDTYRPAALEQLRTLCRRINVEVYGDEKSKDPVQIALKGMEYF
TGARKKDVILIDTAGRHKEEKGLLEEMRLMYNAVRPDLVLLVIDGTIGQQAYAQADAFHK
NVPVGGIIVTKLDGSAKGGGALSATAATGARIMFISTGERIDDLEQFSPTRFVGRLLGMG
DIKALLEMAKQLEQEADEVKIRRIMSGKMTIEDFYYQIEQVGKMGSLRALFEHIPGVAGM
VRDEDVDVMEEKMNRWRYMIQSMSKEERANPDIINASRIRRIARGSGTSERDVKEMLTQY
KRSKDMMKAMKGRQMMGFLKRLGFGKE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggataacctaaagcaagggttaagggcaacgctcaagaaactggtaggagca
tctagcatagatgagaacattataaaggaacttgccagagatgtgcagagatcattgtta
caggcagatgttaatgttaggctagtacttgaactaaccaatagacttcaggagagagca
ttgaaggagcagcctcctccagggctctcaaggaaggatcacatagtgaagatactctac
gaagaactctcaagactgcttggaggaggggatgaggtaggtttggcattgaggaaggat
aagagcaacatcgtgttgatggttggcatagagggttctggcaagacaagtgctactgca
aagcttgcaaaatggttgcttaagcatggctatagcgttggtgttataggcacagatacc
tatagacctgctgcacttgagcagttaagaactctatgcaggaggataaatgttgaggtt
tatggtgatgagaagagcaaggatccagtgcagatagcattgaaaggcatggagtacttc
actggtgcaaggaagaaggatgtgatactcatagatactgctggaaggcataaggaggag
aagggcttgcttgaggagatgaggctcatgtacaatgctgtaaggccagatcttgtactc
cttgttatagatggaacgatagggcagcaggcatatgctcaagcagatgcattccacaag
aatgtaccagtagggggcataatagtaacgaagttggatggttcagcaaagggaggagga
gcactatcagcaactgcagcaactggtgcaaggataatgttcatatctactggcgagagg
atagatgatcttgagcagttctccccaacaaggttcgttggaaggctgctaggcatgggc
gatatcaaagcattgcttgagatggctaagcagttggagcaggaggcagatgaggtcaag
ataaggaggataatgagtgggaagatgaccatagaggacttttactaccagatagagcag
gttgggaagatgggctcattgagggcattgttcgagcatatacctggggtagcagggatg
gttagggatgaggatgttgatgttatggaggagaagatgaacagatggcgttacatgatc
caatccatgagcaaggaggagagggcaaatcctgatatcataaatgcatcaaggataagg
aggatagcaaggggttcaggtacaagcgagagggatgtgaaggagatgcttacccaatac
aagagatcgaaggatatgatgaaggcaatgaagggtaggcagatgatgggcttccttaag
aggttaggctttgggaaggagtag
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