Nocardia cyriacigeorgica: NOCYR_1203
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Entry
NOCYR_1203 CDS
T01756
Symbol
hrdA
Name
(GenBank) RNA polymerase principal sigma factor hrdA
KO
K03086
RNA polymerase primary sigma factor
Organism
ncy
Nocardia cyriacigeorgica
Brite
KEGG Orthology (KO) [BR:
ncy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NOCYR_1203 (hrdA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncy03021
]
NOCYR_1203 (hrdA)
Transcription machinery [BR:
ncy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NOCYR_1203 (hrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HBM
DUF6604
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CCF62003
UniProt:
H6R4D4
LinkDB
All DBs
Position
complement(1328432..1329391)
Genome browser
AA seq
319 aa
AA seq
DB search
MTTRCLPARRTASPTLGTVSDDPIRDYLRAIGRTPLLSAEEEVALAERIAAGVLARQRLD
EAGGLPPAERRALRRTVADGARAKEHMIQANLRLVVSIARRYPTNTGMSLLDLVQEGTFG
LIRAIEKFDHRRGLKLSTYATWWIRQAIGRALADQGRTIRIPVHVVDVLNRVIRTQRTLS
QQLGRDATAAEIAADLEMTESQVTELLQQARDPISLHTPIGEDATEYGALIPDTAPGPDE
LATAATIATQLRAMLGALSDREAEVLTLRYGLDHAEPRSLADIGAALGVSRERARQIEAK
GLSKLRTPGRAKVMAGMLG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
ttgaccacccgatgcctccccgcccgccgcaccgcctcccccaccctcggcaccgtcagc
gacgacccgatccgcgactacctgcgcgccatcggccgcacaccactgctcagcgcggaa
gaggaagtagcgctggccgagcggatcgcggccggtgtcctcgcccggcaacggctggac
gaagccggtgggctcccgcctgccgagcgccgcgcacttcgccgcacggtagccgacggt
gcgcgagccaaggagcacatgatccaggccaacctgcgcctggtcgtctcaattgccagg
cgttatccgaccaacaccggcatgtcgctgctggatctggtgcaggaaggcaccttcggc
ctgatccgggcgatcgagaaattcgatcaccggcgcgggctcaaactgtccacctacgcc
acctggtggatccgccaggccatcggccgcgccctggccgatcagggccgaaccatccgc
atcccggtgcacgtggtggacgtgctcaaccgggtgatccgcacccagcgcaccctgtcc
cagcagctcggccgcgacgccacggctgccgagatcgccgccgacctggagatgaccgaa
tcccaagtgaccgaactacttcagcaggcccgcgacccgatctccctgcacacccctatc
ggcgaggacgccaccgaatacggcgcactcatccccgacaccgcccccggccccgacgaa
ctcgccaccgccgccaccatcgccacccagctgcgcgccatgctcggcgctctgtccgac
cgcgaagccgaagtcctcaccctccgctacggcctcgaccacgccgaaccccgctccctc
gccgatatcggtgccgccctcggtgtttcgcgcgagcgtgcgcgccagatcgaggcgaag
ggtttgtcgaagctgcgcacacccggccgggccaaggtgatggcgggaatgctcggatag
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