Nocardiopsis dassonvillei: Ndas_4190
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Entry
Ndas_4190 CDS
T01248
Name
(GenBank) helicase domain protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nda
Nocardiopsis dassonvillei
Pathway
nda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Ndas_4190
09124 Replication and repair
03420 Nucleotide excision repair
Ndas_4190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nda03021
]
Ndas_4190
03400 DNA repair and recombination proteins [BR:
nda03400
]
Ndas_4190
Enzymes [BR:
nda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ndas_4190
Transcription machinery [BR:
nda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Ndas_4190
DNA repair and recombination proteins [BR:
nda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Ndas_4190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ADH69583
UniProt:
D7AV33
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All DBs
Position
1:5004300..5005946
Genome browser
AA seq
548 aa
AA seq
DB search
MSCLIVQSDKTLLLEVDHELAGECRRAIAPFAELERAPEHVHTYRITPLALWNSRAAGHD
AEQVVDALIRFSKFPVPHSLLVDIAETMDRYGRLRLVGDPRHGLVLESSDRAVLEEVVRA
KKLKGMLGERLGEDSVAVHPSERGNLKQALLKIGWPAEDLAGYVDGEAHPIDLDQDGWEL
RGYQREAAESFHAGGSGVVVLPCGAGKTVVGAAAMAMTGATTLILVTNTVSVHQWKTELL
RRTSLTEDEIGEYSGTRKEIRPVTIATYQVMAARRKGVYTHLELFDARDWGLVVYDEVHL
LPAPIFRMTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDMENQGWIAPAD
CVEVRVDLSEAERLAYATAEPEDRYRFCASSETKTSVVREIVERHPDEQVLVIGSYIDQL
DELGASLGAPVIKGETRNKERERLFDAFRSGDLRTLVVSKVANFSIDLPEAGVAVQVSGS
FGSRQEEAQRLGRVLRPKADGRAARFYAVVARDTLDQDYAAHRQRFLAEQGYAYRITDAG
DLLSGEEI
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctgcctgatcgtccagtccgacaagacgctcctgctggaggtcgaccacgagctg
gccggcgagtgccgccgggccatcgcccccttcgccgaactcgaacgcgcgcccgaacac
gtgcacacctaccggatcacaccgctggccctgtggaactcccgtgccgccgggcacgac
gccgagcaggtcgtggacgcgctgatccggttctccaagttcccggtgccgcactcgctg
ctggtggacatcgccgaaacaatggaccgctacgggcggctgcggctcgtgggcgacccg
cggcacggtctggtcctggagtcctccgaccgcgccgtgctggaggaggtcgtccgcgcc
aagaagctcaagggcatgctgggcgagcggctgggcgaggactcggtcgccgtgcacccg
agcgagcgcggcaacctcaagcaggcgctgctcaagatcgggtggcccgccgaggacctg
gccgggtacgtggacggcgaggcgcaccccatcgacctcgaccaggacggctgggagctg
cgcggctaccagagggaggccgcggagagcttccacgcgggcgggtccggcgtggtggtc
ctgccgtgcggcgcgggaaagaccgtggtcggcgcggcggcgatggccatgaccggggcg
accacgctcatcctggtgacgaacacggtgtcggtgcaccagtggaagaccgagctgctg
cggcgcacctcgctgaccgaggacgagatcggcgagtactcgggcacccgcaaggagatc
cgccccgtcaccatcgcgacctaccaggtcatggcggccaggcgcaagggcgtgtacacg
cacctggagctgttcgacgcccgcgactggggcctggtcgtctacgacgaggtgcacctg
ctgcccgcgccgatcttccggatgaccgccgacctccaggcccggcgccgactgggcctg
accgcgaccctggtgcgcgaggacggccgcgagggcgacgtgttctcgctgatcggcccc
aagcgctacgacgcgccgtggaaggacatggagaaccaggggtggatcgcccccgcggac
tgcgtcgaggtgcgggtggacctgtcggaggccgagcggctggcgtacgcgaccgccgag
ccggaggaccgctaccggttctgcgcctcctccgagaccaagacctcggtggtccgggag
atcgtggagcgccaccccgatgagcaggtgctggtcatcggctcctacatcgaccagctg
gacgagctcggcgcgtcgctgggcgcgccggtgatcaagggcgagacccgcaacaaggag
cgcgagcgcctcttcgacgccttccgctccggggacctgcggacgctggtggtgtcgaag
gtcgcgaacttctccatcgacctgcccgaggccggtgtcgcggtgcaggtgtcggggtcc
ttcggctcgcggcaggaggaggcgcagcggctcggccgggtactgcgccccaaggccgac
ggccgcgccgcccgcttctacgcggtggtggcgcgcgacaccctcgaccaggactacgcc
gcgcaccggcagcgcttcctggccgagcaggggtacgcctaccggatcaccgacgccggc
gacctgctgtcgggcgaggagatctga
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