KEGG   Nocardiopsis dassonvillei: Ndas_4190
Entry
Ndas_4190         CDS       T01248                                 
Name
(GenBank) helicase domain protein
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
nda  Nocardiopsis dassonvillei
Pathway
nda03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Ndas_4190
  09124 Replication and repair
   03420 Nucleotide excision repair
    Ndas_4190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nda03021]
    Ndas_4190
   03400 DNA repair and recombination proteins [BR:nda03400]
    Ndas_4190
Enzymes [BR:nda01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Ndas_4190
Transcription machinery [BR:nda03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Ndas_4190
DNA repair and recombination proteins [BR:nda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Ndas_4190
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: ADH69583
UniProt: D7AV33
LinkDB
Position
1:5004300..5005946
AA seq 548 aa
MSCLIVQSDKTLLLEVDHELAGECRRAIAPFAELERAPEHVHTYRITPLALWNSRAAGHD
AEQVVDALIRFSKFPVPHSLLVDIAETMDRYGRLRLVGDPRHGLVLESSDRAVLEEVVRA
KKLKGMLGERLGEDSVAVHPSERGNLKQALLKIGWPAEDLAGYVDGEAHPIDLDQDGWEL
RGYQREAAESFHAGGSGVVVLPCGAGKTVVGAAAMAMTGATTLILVTNTVSVHQWKTELL
RRTSLTEDEIGEYSGTRKEIRPVTIATYQVMAARRKGVYTHLELFDARDWGLVVYDEVHL
LPAPIFRMTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDMENQGWIAPAD
CVEVRVDLSEAERLAYATAEPEDRYRFCASSETKTSVVREIVERHPDEQVLVIGSYIDQL
DELGASLGAPVIKGETRNKERERLFDAFRSGDLRTLVVSKVANFSIDLPEAGVAVQVSGS
FGSRQEEAQRLGRVLRPKADGRAARFYAVVARDTLDQDYAAHRQRFLAEQGYAYRITDAG
DLLSGEEI
NT seq 1647 nt   +upstreamnt  +downstreamnt
ttgtcctgcctgatcgtccagtccgacaagacgctcctgctggaggtcgaccacgagctg
gccggcgagtgccgccgggccatcgcccccttcgccgaactcgaacgcgcgcccgaacac
gtgcacacctaccggatcacaccgctggccctgtggaactcccgtgccgccgggcacgac
gccgagcaggtcgtggacgcgctgatccggttctccaagttcccggtgccgcactcgctg
ctggtggacatcgccgaaacaatggaccgctacgggcggctgcggctcgtgggcgacccg
cggcacggtctggtcctggagtcctccgaccgcgccgtgctggaggaggtcgtccgcgcc
aagaagctcaagggcatgctgggcgagcggctgggcgaggactcggtcgccgtgcacccg
agcgagcgcggcaacctcaagcaggcgctgctcaagatcgggtggcccgccgaggacctg
gccgggtacgtggacggcgaggcgcaccccatcgacctcgaccaggacggctgggagctg
cgcggctaccagagggaggccgcggagagcttccacgcgggcgggtccggcgtggtggtc
ctgccgtgcggcgcgggaaagaccgtggtcggcgcggcggcgatggccatgaccggggcg
accacgctcatcctggtgacgaacacggtgtcggtgcaccagtggaagaccgagctgctg
cggcgcacctcgctgaccgaggacgagatcggcgagtactcgggcacccgcaaggagatc
cgccccgtcaccatcgcgacctaccaggtcatggcggccaggcgcaagggcgtgtacacg
cacctggagctgttcgacgcccgcgactggggcctggtcgtctacgacgaggtgcacctg
ctgcccgcgccgatcttccggatgaccgccgacctccaggcccggcgccgactgggcctg
accgcgaccctggtgcgcgaggacggccgcgagggcgacgtgttctcgctgatcggcccc
aagcgctacgacgcgccgtggaaggacatggagaaccaggggtggatcgcccccgcggac
tgcgtcgaggtgcgggtggacctgtcggaggccgagcggctggcgtacgcgaccgccgag
ccggaggaccgctaccggttctgcgcctcctccgagaccaagacctcggtggtccgggag
atcgtggagcgccaccccgatgagcaggtgctggtcatcggctcctacatcgaccagctg
gacgagctcggcgcgtcgctgggcgcgccggtgatcaagggcgagacccgcaacaaggag
cgcgagcgcctcttcgacgccttccgctccggggacctgcggacgctggtggtgtcgaag
gtcgcgaacttctccatcgacctgcccgaggccggtgtcgcggtgcaggtgtcggggtcc
ttcggctcgcggcaggaggaggcgcagcggctcggccgggtactgcgccccaaggccgac
ggccgcgccgcccgcttctacgcggtggtggcgcgcgacaccctcgaccaggactacgcc
gcgcaccggcagcgcttcctggccgagcaggggtacgcctaccggatcaccgacgccggc
gacctgctgtcgggcgaggagatctga

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