KEGG   Neisseria dentiae: H3L92_04990
Entry
H3L92_04990       CDS       T07671                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
ndn  Neisseria dentiae
Pathway
ndn02024  Quorum sensing
ndn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ndn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H3L92_04990 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    H3L92_04990 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ndn03019]
    H3L92_04990 (hfq)
   03036 Chromosome and associated proteins [BR:ndn03036]
    H3L92_04990 (hfq)
Messenger RNA biogenesis [BR:ndn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     H3L92_04990 (hfq)
Chromosome and associated proteins [BR:ndn03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    H3L92_04990 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QMT46130
LinkDB
Position
complement(1055982..1056266)
AA seq 94 aa
MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYVVLLRNTSVTQMVYKHA
ISTIVPARAVSLQHEHKQSQAAAPVQVETQQAAE
NT seq 285 nt   +upstreamnt  +downstreamnt
atgaccgctaaagggcaaatgttacaagatccttttttgaacgctttgcgtaaagagcac
gtgccggtttccatttatctggtaaacggcatcaaacttcaggggcaggttgaatcgttc
gaccaatatgttgtgttgttgcgcaacacctcggtaacgcaaatggtttacaaacacgcc
atttccaccattgttccggcacgcgcggtgagcttgcagcacgaacacaaacaatctcag
gccgcagcccccgttcaagtggaaacccaacaggctgccgaataa

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