Novosphingobium decolorationis: HT578_06035
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Entry
HT578_06035 CDS
T07993
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr01501
beta-Lactam resistance
ndr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HT578_06035
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HT578_06035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ndr02000
]
HT578_06035
01504 Antimicrobial resistance genes [BR:
ndr01504
]
HT578_06035
Transporters [BR:
ndr02000
]
Other transporters
Pores ion channels [TC:
1
]
HT578_06035
Antimicrobial resistance genes [BR:
ndr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HT578_06035
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
HT578_06035
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
HT578_06035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QVM83316
UniProt:
A0ABX8E5I4
LinkDB
All DBs
Position
complement(1341597..1343054)
Genome browser
AA seq
485 aa
AA seq
DB search
MSTIFPSRVAASALLAATISLAGCAPDLGPKPEIRALSSFEMERSIAAAGQGEEWPPSQW
WRGYDDPQLDALIEAALTDSPDLASAIARVRQARGALQASRSSVLPSLGAQGSGEFAKQS
YNNGTPASALPQGWEDYGTLALSANWNLDIWGKNRALLAAATSATEAALAEVRQAELVLT
SEIASSYFDLARLLEREKVLEEALKVRESSEELTAKRFEQGLENEVPLRQARAEVARARG
LIVANREQIARRRHALAALLGAGPDRTHDLVPVPLERIAMTRVPADAGIALAGRRPDIVA
ARRIVEASQSGTEYARKSFLPDVSLGGLIGLTSLGISNLFNDGSDYGSAGAAVSLPIFQG
GALSGRYRVARAGYDSMVASYNKTVIEALQEVADAIASRDSASRQREHALDVETEAEAAF
GLASQRYGAGLTTYIEVLTSQTSELDARLSALDAQFATLASDVALKRALGGGYAEENDEK
ANSDD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgatatttccctcacgagtcgcagcaagtgccctcttggctgccacgatttcg
cttgccggatgtgcgccggatctggggcccaagcccgagattcgggcgctatcctcgttc
gagatggagcggtcgatcgcggctgccggacagggcgaggaatggccgccgtcccagtgg
tggcggggctatgatgacccgcaactggatgcgctgatcgaggcagcccttacggattcg
ccggatctggcttccgcgattgcacgcgtgcgccaggcgcgcggtgcgctccaggcatca
cgttcgagcgtgttgccctcgctcggtgcgcaaggttcgggcgaattcgccaagcagagc
tacaacaatgggaccccggcatccgcccttccgcagggctgggaagactatgggaccctg
gccctgtccgcgaactggaacctggatatctggggcaagaaccgcgcgctccttgcggcc
gccacctcggccacggaggcggccctcgccgaagtgcgacaggcggaactcgtcctgacc
agcgaaatcgcctcgtcctatttcgaccttgcacgcctgctggagcgcgagaaagtcctc
gaggaagcgctgaaggtgcgcgaaagctccgaggagctgacggccaagcggtttgaacaa
ggactggagaacgaggtcccactgcgccaggcgcgggccgaggtggcccgcgcgcggggg
ctgatcgtcgccaaccgtgagcagatcgccaggcggcgccacgcgctcgcggcccttctt
ggggctggaccggatcggacgcacgatcttgtcccggtccccctcgaacgtatcgcgatg
acgcgcgtgccggcagatgcgggtatcgctcttgccggccgcagaccggacatcgtcgcg
gcgcgccgtattgtcgaggcttcgcagagcggcacggaatatgcccgcaagtcgttcctg
cccgacgtatcccttggaggcctgatcggtctgacctcgctcgggatctccaatctgttc
aacgacggttcggattacggcagcgcgggggcggcggtcagcctgccgatcttccagggt
ggcgccttgtccggtcgctaccgcgtggcgcgggccgggtacgattcgatggtcgcaagc
tacaacaagaccgtgatcgaggctctgcaggaagtcgcagacgcgattgcgagccgggat
tccgcatcccgtcagcgtgagcacgccctggacgtcgagacagaggctgaggccgcgttc
ggtctcgcctcgcagcgctacggggcggggctcaccacctacatcgaggtcctgaccagc
cagacttccgaactcgatgcgcgcctctccgcgcttgatgcccaatttgcaacgctggcc
agcgatgtcgcgctcaagcgcgcgcttggcggcggctatgccgaagaaaacgacgagaaa
gccaatagcgatgactga
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