Natator depressus (flatback sea turtle): 142000314
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Entry
142000314 CDS
T11397
Symbol
SMG8
Name
(RefSeq) LOW QUALITY PROTEIN: nonsense-mediated mRNA decay factor SMG8
KO
K18734
protein SMG8
Organism
nds Natator depressus (flatback sea turtle)
Brite
KEGG Orthology (KO) [BR:
nds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nds03019
]
142000314 (SMG8)
Messenger RNA biogenesis [BR:
nds03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
142000314 (SMG8)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142000314
NCBI-ProteinID:
XP_074830594
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Position
17:5110063..5120474
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AA seq
981 aa
AA seq
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MPSSSEGSVAXAAAAMTVPVSLRELLLAGGGGGAGAPVPAPVEEEVVCVVGIFGKTALQL
SSEKAALVSTVCDRQVFPLFQREGAGPGGAEPEAGGEPGAGEEEAAAQDYNLLQAYYSQE
SKVLYLVLTSICDTPQLLQACRDLSAGDARVPGLGHPPGAPLPHAEAHEFWKHQEKLHCL
SLLYLFSVCHILLMVHPTCSFDITYDRVFRALDGLRQKVLPSLKAAIKDCPVGKEWKLNC
RPCPPRLLFLFQLNGALKVDPPPGRGQDLCGQLEKPPPKKHSPKRRLQHALEDQIYRIFR
KSRVLTNQSINCLFTVPANQAFVYIVAGGAQDGEDPVAMLLEQLRGNCTMKETDSLLAST
LAGPRRYQMMRHGRQQLSFHVESSSSSSSSSGQLVDCTLKEFLWQHVELVLSKKGFDDSV
GRNPQPSHFELPTYQKWVAAAQKLYEVAIEGKDDDPASPTGELTSKIMGSIKVLEGYLDI
DTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYAMQL
HEDCYKFWSNGHQLCEERSLTDQHCVHKFHLLPKSGEKPEPDRNPPVLYHNSRARSTGAC
NCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPIFQPSTPDPAPAKNETSPAP
PEGEAEKLKEKEPQTQGESTSLSLALSLGQSTDSLGTYPADPQGGGDNAETHGQASESKS
EKRPSLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKAYNFHTGLDQQGFIP
GTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAVPGKRSAVVMGRGRRRDDIARAFVGFE
YEDARGRRFMCSGPEKVMKVMGSGPKESAIKALNSDMPLYILSSTQGRGLKPYYAQFIRL
FVVVPDAPLQIILTPQVQPGPPPCPTFYPEKQEITLPPDGLWVLRFPYAYVTERGPCFPP
KENQQLMSYKVVRGILKAITQ
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtagctccgaaggtagtgtggccnntgctgcggcggcgatgaccgtgccggtg
agcctgcgggagctgctgctggctggcggcggcggcggggcgggcgccccggtccccgcc
cccgtggaggaggaggtggtgtgcgtggtgggcatcttcggcaagacggccctgcagctg
agctccgagaaggcggcgctggtgagcaccgtgtgcgaccggcaggtcttccccctcttc
cagcgagagggcgcggggccgggcggggccgagcccgaggccggcggggagcccggggcc
ggcgaggaggaggccgccgcccaggactacaacctgctgcaggcctattacagccaggag
agcaaggtgctgtacctggtgctcacctccatctgcgacaccccccagctgctgcaggcc
tgcagggacctcagcgccggggacgccagggtgccggggctcggccacccccctggcgcc
ccgctgccccacgccgaggcccatgagttctggaagcaccaggagaagctgcactgcctg
agcctcctctacctcttctccgtctgccacatcctgctgatggtgcaccccacctgctcc
ttcgacatcacctatgaccgtgtcttcagggccctggatgggctgaggcagaaggtactg
ccctccctcaaggctgccatcaaggactgcccggttggcaaggagtggaagctcaactgc
agaccgtgcccaccccgcctcctcttcctcttccagcttaatggggctctgaaggtggac
cccccaccgggcagggggcaagatctctgtggccagctggagaagcccccacccaagaag
cattcacccaagaggaggttgcagcatgccctagaggaccagatctaccgcatcttccgt
aagagtcgggtgctgaccaaccagagcatcaactgccttttcactgtgcctgctaaccag
gcctttgtctacattgtggctggtggggcccaggatggagaggacccagtggccatgctg
ctggagcagctcaggggcaactgcacaatgaaagagaccgattccttgctggcatccacc
ttggcggggcccaggagatatcagatgatgagacatggcaggcagcagctgtccttccat
gttgagagtagcagtagcagctccagctcctctgggcagttggtggactgcaccctcaag
gagttcctgtggcagcacgtggagctggtgctaagtaagaaaggcttcgatgatagtgtg
gggagaaaccctcagccctctcactttgagcttcccacatatcagaagtgggttgctgca
gctcagaaattgtatgaagttgccattgaggggaaggatgatgacccagcttcccccact
ggggaactgacctccaaaatcatgggaagcatcaaagtcttggaggggtacctagatata
gacaccaagttttctgaaaaccgttgccaaaaggctctccccatggcccacagtgcctac
cagtccaacctgccccacaactacactatgacagttcataagaatcagctagcccaagcc
ttgcgtgtgtacagccagcatgcccggggaccagcctttcacaagtatgccatgcaactt
catgaagactgttacaagttctggagcaacgggcatcagctgtgtgaggagcgaagttta
actgatcagcactgtgtgcataaatttcacttactccccaaatcaggggaaaaaccagag
ccagatagaaacccaccagtgttgtatcacaacagccgggctcgctccactggtgcctgt
aactgtgggaggaaacaagcaccccgggatgatccctttgatatcaaagcagccaattat
gacttctatcagctgctggaagagaaatgttgtgggaaactggatcacatcaacttccca
atatttcagccgagtacacctgatccagcaccagccaagaatgagacctcacctgcccct
ccagaaggagaagctgaaaaacttaaagaaaaagagcctcaaacccagggagaaagcacc
agcctgagcttagcccttagtttgggtcaatcgacggatagcctgggcacctacccagct
gatcctcaaggtggaggagacaatgcagagactcacgggcaagcatcagagtctaaaagc
gagaagaggccgagcttggtagatcggcaggcatccactgttgagtatcttcctggcatg
ctccattctaattgccctaaggggcttcttcccaaattctctagctggtcactggtcaaa
cttggccctgctaaggcttataactttcacacaggcttagaccaacagggcttcatacca
ggaacaaactacttaatgccttgggacattgtcatcaggacaagagctgaagatgaggga
gatctggacactaattcctggcctgctcctaataaagctgttcctggcaaacgaagtgca
gttgtaatgggaagaggaaggcggagagatgacatagctcgagccttcgttggatttgaa
tatgaagacgcccgtggtcggaggttcatgtgttcagggccggagaaagtcatgaaggtg
atgggaagtgggccaaaagaatcagctataaaagcccttaattctgatatgcccttatac
atcctctcatcaactcaaggacgaggacttaaaccatattatgctcagtttataagactc
tttgttgtggtgccagatgctccactgcagataatactgacacctcaggttcaaccagga
cctccgccttgccctacattttaccctgagaaacaggaaataaccctcccgcctgacgga
ctgtgggtgctgcgattcccttacgcttatgtgacagaacgtggaccctgttttcctcct
aaagaaaaccagcagttaatgagttataaggttgttcgaggaatactaaaagcaattaca
caataa
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