KEGG   Nitrosotalea devaniterrae: NDEV_0387
Entry
NDEV_0387         CDS       T04889                                 
Symbol
rrp
Name
(GenBank) Exosome complex component Rrp41
  KO
K11600  exosome complex component RRP41
Organism
ndv  Nitrosotalea devaniterrae
Pathway
ndv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ndv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NDEV_0387 (rrp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ndv03019]
    NDEV_0387 (rrp)
Messenger RNA biogenesis [BR:ndv03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     NDEV_0387 (rrp)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     NDEV_0387 (rrp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: CUR51152
UniProt: A0A128A1E2
LinkDB
Position
1:351975..352679
AA seq 234 aa
MTEDGIRCDGRRLDELRNISIKVGVLKNADGSAYIEFGKNKILAGVFGPRDVHPKHMANP
DSGILRCRYHMSPFSVTERKNPAPSRREIEISKVIKEALQPAVILKDYPRTVIDVFIEVL
QADGGSRCAALDAAAVALADAGIPMRDLVSACAAGKVADRIVLDVNNEEDQEGQADMPVA
LMPNLGKVTLLQLDGMLKPEEFKTCMQTALVGCKRVYEIQRKALMEKYFQNGEQ
NT seq 705 nt   +upstreamnt  +downstreamnt
atgactgaagatggaattagatgtgatggaaggagacttgatgaacttagaaacatctcc
attaaagttggagtactaaaaaatgcagatggatctgcatatattgaatttggaaagaac
aaaattttagcaggagtatttggtcctcgagatgttcacccaaaacacatggcaaatcca
gattctggaattcttcgttgcagataccacatgtcacctttctccgtaactgagagaaaa
aatcctgctccatcaagaagagaaattgaaatttccaaagttatcaaagaagcattacaa
ccagctgttatactaaaagactatccacgaactgtaattgatgtattcattgaagtgctc
caagcagatggtggctctagatgtgcagcacttgatgcggcagcagttgctcttgcagat
gcaggtataccaatgcgtgacttggtttctgcttgtgcagcaggcaaagtcgcagatagg
attgttctagatgtaaataatgaagaagaccaagaaggacaagcagacatgccagtggca
ttgatgccaaatcttggaaaagttacactattgcagcttgatggaatgctaaaaccagaa
gaattcaaaacttgtatgcaaaccgctctagtgggttgcaagcgagtctatgaaatccag
agaaaagcattaatggaaaaatacttccaaaacggtgagcaataa

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