Neorhizobium sp. NCHU2750: NCHU2750_36190
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Entry
NCHU2750_36190 CDS
T05650
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nen
Neorhizobium sp. NCHU2750
Pathway
nen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCHU2750_36190 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nen03019
]
NCHU2750_36190 (recQ)
03400 DNA repair and recombination proteins [BR:
nen03400
]
NCHU2750_36190 (recQ)
Enzymes [BR:
nen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCHU2750_36190 (recQ)
Messenger RNA biogenesis [BR:
nen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCHU2750_36190 (recQ)
DNA repair and recombination proteins [BR:
nen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCHU2750_36190 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AYD03004
LinkDB
All DBs
Position
complement(3779561..3781420)
Genome browser
AA seq
619 aa
AA seq
DB search
MQGRTKEAEVSFSGRAMRDPLEVLRNVYGYPSFRGQQAGVVDHVVSGGDAVVLFPTGAGK
SLCFQIPALCRQGVGIVVSPLIALMRDQVEALKQVGVRAAALNSSLSREEFDDVRRDLVS
GSLDLLYVTPERITTPGFRDVIGNARIALFAIDEAHCVSQWGHDFRPEYRQLGELARLYP
GVPRMALTATADPHTRDDIIERLALTGARVFISSFDRPNIAYEIVERDQPRQQLLRFLSR
HKGASGIVYCLSRAKVEETAEWLEAQGIRALPYHAGMERGVRDANQDAFLKEEELCLVAT
VAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRGRMID
GGNSSDDVKRVERAKLNALLGICETAGCRRQAILAHFGEAHAGQCGNCDTCLKPVDTWEG
TEAAIKALAAIYRTGERFGTGHVIDVLLGNDNDKTRRFGHTEMPVFGAGRDLPLKTWQSV
YRQLLAAGLIRVDHDAFGALKLEPDARAVFRHEREVHFRKDRPTGRKADRTLSSSAKGAR
SQLDEADMGLFEALRRKRMEIAKDLSIPPYVVFADTTLVAFATLRPASHDAFLDISGVGQ
AKLERYGDAFLDVIRAHDG
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaagaacaaaggaggccgaggtctcttttagcggaagagcgatgcgcgatccg
cttgaggtattgcgcaacgtctatggctatccgtcgtttcgcggccagcaggccggcgtg
gtcgatcatgtcgtgtcgggcggtgatgccgtcgtgctgtttccgacgggtgcgggcaag
tcgctgtgtttccagatccctgcgctctgccggcaaggggtcggtatcgtcgtctcgccg
ctgatcgcgctgatgcgggaccaggtggaggcgttgaagcaggtcggcgtgcgtgccgcg
gcgctgaattcctccctgtcgcgggaggagttcgacgatgtgcgtcgcgatctggtgtcg
gggtcactcgatctgctttatgtgacgcctgagcggatcaccacgcccggttttcgggat
gtgatcggcaatgcccgcatcgcgctctttgccatcgacgaggcgcattgcgtttcacaa
tgggggcatgacttccgtccggaatatcgccagctcggcgagcttgcacggctttatccg
ggcgtgccgagaatggcgctgacggccaccgccgacccgcatacgcgcgacgacatcatc
gaaaggctggcgctgacgggtgccagggtcttcatctcttccttcgaccgtcccaacatc
gcctatgaaatcgtcgagcgcgaccaaccgcgccagcaactcttgcggttcctgtcgcgg
cacaagggagcgagcggcatcgtctattgcctgtcgcgggccaaggtggaggagacggcg
gaatggcttgaggcgcagggcattcgcgcgctgccctatcatgccggcatggagcgcggg
gttcgtgacgccaaccaggatgcgtttctgaaggaagaggagctttgcctcgttgccacg
gttgccttcggcatgggtatcgacaagccgaatgtgcgttatgtcgcccatctcgacctg
ccgggctcggtcgaggcttattatcaggagaccgggcgcgcagggcgtgacggcctgcct
tcggaagtgtggatggcctatggcatggccgacgtcatccagcgcgggcggatgattgac
ggcggcaattccagcgacgacgtgaagcgagtggagcgtgccaagctcaatgcgctgctc
ggcatttgcgagacggcgggttgccggcgccaggcgatccttgcgcatttcggcgaggcg
catgccgggcaatgcggcaattgcgatacctgcctcaaaccggtcgatacctgggagggg
acggaggctgcgatcaaggcactggcggcgatctacagaaccggcgagcggttcggcacc
ggtcatgtcatcgatgtgctgctcggcaacgacaatgacaagacccgtcgtttcggccat
accgagatgccggtgttcggcgccggccgcgacctgccgttgaaaacctggcagtcggtc
tatcgccagcttctggctgccggcctgatcagggtcgatcacgatgcattcggggcgctg
aagctggagcccgacgcgagagcggtgttccgccacgagagagaggtgcatttccgcaag
gaccgcccgaccggccgcaaggccgaccggaccctttcatcgtcggcaaaaggcgcccgt
tcgcaactggacgaggcggacatgggcctgttcgaggccttgcggcgcaaacggatggag
atcgccaaggatctttccattccgccctatgtcgtgttcgccgatacgacccttgtggcg
ttcgcgacgctgcgtccggccagccatgacgcgtttctcgacatttccggtgtcggtcag
gcgaagctcgaacgctatggcgacgcatttctcgacgtcattcgcgcgcatgacggctaa
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