Nitrosomonas europaea: NE1460
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Entry
NE1460 CDS
T00130
Symbol
ffh
Name
(GenBank) Signal recognition particle GTPase ffh protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
neu
Nitrosomonas europaea
Pathway
neu02024
Quorum sensing
neu03060
Protein export
neu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
neu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NE1460 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NE1460 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NE1460 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
neu02044
]
NE1460 (ffh)
Enzymes [BR:
neu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NE1460 (ffh)
Secretion system [BR:
neu02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NE1460 (ffh)
Eukaryotic Sec-SRP protein
NE1460 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
ArsA_ATPase
cobW
AAA_31
AAA_30
nSTAND3
APS_kinase
AAA_16
ParA
KTI12
Helicase_RecD
AAA_33
CLP1_P
IFT57
Fer4_NifH
AAA_14
AAA_19
VirC1
ATP_bind_1
Thymidylate_kin
DUF6381
Motif
Other DBs
NCBI-ProteinID:
CAD85371
UniProt:
Q82UM3
LinkDB
All DBs
Position
1595257..1596603
Genome browser
AA seq
448 aa
AA seq
DB search
MFDNLTERLSDVIKTLRGEARLTESNIQDALREVRMALIEADVALPVIKIFIEQVKQRAI
GHEVLDKLSPGQALIGVVHEELVAIMGGDKAELNLNVAPPAVILMAGLQGAGKTTSSGKL
AKWLMDQKKKVLLVSCDVYRPAAIDQLALLAEQTGADFFPVQTGRQPAEICTAALDFARK
HHHDVVIVDTAGRLGIDEAMMREISQLEQLLKPAETLFVVDAMQGQDAVNTAKAFAEVLP
LTGVILTKLDGDARGGAALSVRHITGKPIKFAGVAEKLNGLEPFYPDRMASRILGMGDVL
GLIEEAQRTSDQKEAERLMKKMKSGKSFDLNDFQQQFQQMKKMGGMSAMLEKLPHQLSQA
AQNMNVDEKIINRTEGIINSMTPQERIKPEIIKASRKRRIAAGSGVSVQEVNRLLSQFEQ
ARKMMKMMNKGGMAKMMRAVKGMLPHMR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaatttaaccgaacgactttccgatgtcatcaaaacgttgcgtggtgaggca
cgcctgactgaaagcaatattcaggatgcgctgcgcgaggtacgcatggccctgatcgag
gcagatgtagccttgccggtcatcaaaatattcatcgagcaagtcaagcaacgtgcaatc
ggtcacgaagtactggacaaactctctcctggccaggcactcatcggtgttgttcatgag
gagctggtcgccatcatgggcggcgacaaggcggaactcaatctgaatgttgctccgcct
gctgtcattctcatggcagggttgcaaggtgccggtaaaaccaccagcagcggcaaactg
gcgaaatggttgatggatcagaagaaaaaggtcctgctggtgtcctgcgacgtttatcgc
cccgcggcaatcgatcaactggcgctgctggctgaacaaaccggagccgatttcttcccg
gtacaaaccggccggcaacctgctgaaatctgtactgcagccctggatttcgcacgtaag
catcatcatgacgtggtaatcgtcgatactgccggacgactgggtatcgacgaagccatg
atgcgggaaatcagtcagctggaacaattgctgaagccggctgaaacattgtttgtcgtc
gatgccatgcagggacaggatgcggtcaataccgccaaagcctttgcagaagtactgcca
ctgactggtgtaattctcaccaagctcgatggtgatgcacgtggaggagcggcactttct
gtccggcacattaccggcaaaccgatcaaatttgccggtgtcgctgaaaagctgaacggg
ctggaaccgttttatcccgaccgcatggcttcgcgcatcctgggtatgggggacgtgctc
ggactgatcgaggaagcacagcgaacatcagatcagaaagaagcagaacgcctgatgaag
aaaatgaaatcaggcaagagtttcgatctcaacgatttccagcaacagtttcagcagatg
aaaaaaatgggcggcatgagcgccatgctggaaaaactgcctcaccagttgagtcaggcc
gcacaaaacatgaatgtcgatgaaaaaatcatcaaccgtaccgaaggcatcatcaactcc
atgacacctcaggaacggatcaagccggagattatcaaagcttcccgcaaacgtcgaatt
gctgcaggctccggtgtttccgtacaggaagtcaatcgcctactctcacaattcgagcaa
gcacgcaagatgatgaaaatgatgaataaaggtggtatggcaaaaatgatgagagcagtc
aagggaatgctcccacacatgcggtag
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