Nocardiopsis exhalans: NE857_09505
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Entry
NE857_09505 CDS
T08285
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nex
Nocardiopsis exhalans
Pathway
nex00040
Pentose and glucuronate interconversions
nex01100
Metabolic pathways
nex02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NE857_09505
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NE857_09505
Enzymes [BR:
nex01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
NE857_09505
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
USY21817
UniProt:
A0ABY5DCR7
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Position
2100691..2101845
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AA seq
384 aa
AA seq
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MRLHPLAAACLAALLCAALTSCSRQEEDSDEAFDPPVGAAVDPGAGEADDASPPPERPEA
EWSFGTPVGWADQPKAVAAPTQDPADEDTTDEDGDAAEASASPGDEPTLEDEPVGPTEYP
GVTGGAGGETVTATDADELAEHLSAAEPLVVEVEGDIDLDGTLRVASDKTLLGVGEGAEL
TGGGLVVDGSSNVILANLGMVSDGPAIAVRGGAHHVWVDGSTFSGGGDSALIAVTDGSDH
VTLSWNHFAEAESAVIIGGRDDQPGALRVTVHHNFFDGTSGRHPRARNAEHVHVFNNYFR
DNPEYGVESAYGSNVLVEGNYFEGTPVSVSTETDEPGNVVTRDNLLVDSKQPQLRGNVPD
PPYAYELDDTVNVPEAVMNRAGTD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcgactccaccctctcgccgccgcgtgcctggcggccctgctgtgtgcggccctcacc
tcttgctcccggcaggaggaggactccgacgaggccttcgatccccccgtcggggcggcg
gtggacccgggagccggggaggcggacgacgccagcccgcccccggagcggccggaggcg
gaatggtccttcggcacccccgtcggctgggccgaccagcccaaggcggtcgcggccccc
actcaggacccggctgacgaggacaccacggacgaggacggcgacgccgcggaggcctcg
gcgagccccggggacgagccgacccttgaggacgagccggtcggccccaccgagtacccc
ggggtgaccggtggagccgggggcgagacggtgaccgccaccgacgccgacgaactcgcc
gagcacctgtccgcggccgaacccctggtggtcgaggtcgagggcgacatcgacctcgac
ggcaccctccgggtcgcctcggacaagaccctgctcggagtgggcgagggcgccgaactc
accggcggcggcctggtcgtggacggttccagcaacgtcatcctcgccaacctgggcatg
gtctccgacggccccgcgatcgcggtccgcggcggggcccaccacgtgtgggtggacggc
tccaccttctccgggggcggggacagcgccctgatcgccgtcaccgacgggtccgaccac
gtcaccctctcctggaaccacttcgccgaggccgagtccgcggtcatcatcggcggccgc
gacgaccagcccggcgcgctgcgcgtgaccgtgcaccacaacttcttcgacggcacctcc
ggccgacacccgcgtgcccgcaacgccgagcacgtccacgtgttcaacaactacttccgg
gacaaccccgagtacggggtcgagtccgcctacggatcgaacgtgctggtcgagggcaac
tacttcgagggcaccccggtgtcggtgtccaccgagaccgacgaaccgggcaacgtggtc
acccgggacaacctgctggtcgactccaagcagccccagctgcgcggcaacgtgcccgac
ccgccctacgcctacgagctcgacgacaccgtcaacgtccccgaagcggtcatgaaccga
gccggtaccgactga
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