Nocardiopsis exhalans: NE857_14600
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Entry
NE857_14600 CDS
T08285
Name
(GenBank) rhamnogalacturonan lyase
KO
K18198
rhamnogalacturonan exolyase [EC:
4.2.2.24
]
Organism
nex
Nocardiopsis exhalans
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NE857_14600
Enzymes [BR:
nex01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.24 rhamnogalacturonan exolyase
NE857_14600
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
USY22725
UniProt:
A0ABY5DFK6
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Position
3302515..3304842
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AA seq
775 aa
AA seq
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MRTPPRSLLKASPLAAAACLALLAPAATAAAEPRPEAGVQLERLDRGLIAVKTEEGVFLS
WRLLASEVSGHTGSGLQGPLFRVYRDGKVVGMVRDSTNFLDERGTAASEYRVVPVPRGRP
GAGPEGEASVWAEGHHDLPLHKPEGGTTPAGEAYEYTANDVSVGDVTGDGRYEFVVKWDP
TNSKDVSQKGYTGNTYVDTYTLEGELLHRVDLGVNIRSGAHYTQPLVYDFDGDGRAELMF
KTAPGTRTLTFDEDGQVSAEGYITLPQEDVEAGHTHDDDHRMSSQDYYEHLVETFRGWHE
HPEVESGNWPATLEEAFGLEPGYEYPLSHGDAEALADHFIDEYAPARSGRNDLRDFEGFV
VHGPEYLTVFDGLTGAELDTVRYEPGRGDDGLMWGDYAMARIEPGNRVDRFLSGVAYLDG
SSPSAVFTRGYYTRSALAAYDFDGESLQKRWLADSGHVPMDNPFDASPHGGAGTDPELGT
LAGQGFHSFSVADVDGDGRQEIVYGAATVDDDGSLLYSSYAYGPPESDVAGEYVKLGHGD
AMHVGDLDPRREGLEVWTVHEGATHAPYGFAMRDAATGEVLFGGYTGTDTGRGMVGDIDP
DTPGLEAWSSMPPGDDVEAGLWSADGEFMGDRTPGTNMSIRWSADMTTQIVEGMATPDVT
QTPRIEDWNRGTLLTAEGTLTNNGTKGNPGLVADVFGDWREEMVVRTEDSTALRILTSTE
VTDRKLHTLMHDPQYRVGVAGQQSGYNQPTYPGFYFGSDIDWSRVQVPEAHYPKP
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaggacccccccacgttcccttctgaaagcgagtcccctggcagccgccgcctgcctg
gccctgctggcgcccgccgccaccgcggccgccgaaccccggcccgaggccggagtccag
ctggagcggctggacaggggcctgatcgcggtcaaaaccgaggaaggcgttttcctgagc
tggcgcctgctcgcctccgaggtcagcggccacaccggctcagggctccagggccccctg
ttccgggtgtaccgggacggcaaggtcgtcgggatggtcagggacagcaccaacttcctg
gacgagcggggaaccgccgcctccgagtaccgcgtcgttcccgtcccacgcgggcggccc
ggcgccggccccgagggcgaggcctccgtgtgggccgaaggccaccacgacctgcccctg
cacaaacccgagggcggcacgaccccggccggagaggcctacgagtacaccgccaacgac
gtcagcgtgggcgacgtcaccggagacggccgctacgagttcgtggtcaagtgggacccc
accaactccaaggacgtctcccagaagggctacaccggcaacacctacgtggacacctac
acgctggagggcgagctgctgcaccgcgtcgacctgggcgtgaacatccgctcgggcgcg
cactacacccagccactggtctacgacttcgacggcgacggccgggccgagctgatgttt
aagaccgctcccggaacgaggacgctgaccttcgacgaggacggccaggtgtcggccgag
gggtacatcaccctgccgcaggaggacgtcgaggcgggccacacccacgacgacgaccac
cgcatgagctcacaggactactacgagcacctcgtggagaccttccggggctggcacgag
caccccgaggtcgagtccgggaactggcccgcgaccctggaggaggccttcggcctggaa
ccgggttacgagtacccgctcagccacggggacgccgaggcgctcgccgaccacttcatc
gacgagtacgcgcccgcgcgcagcggccgcaacgacctgcgcgacttcgagggattcgtc
gtccacggccccgagtacctgacggtcttcgacgggctgaccggcgcggagctggacacc
gtccgctacgaacccggacgcggcgacgacggcctgatgtggggcgactacgcgatggcg
cgcatcgagcccggcaaccgggtcgaccgcttcctgtcgggcgtggcctacctggacggc
agcagcccttcagctgtcttcacccggggctactacacgcgctcggccctggccgcctac
gacttcgacggcgagtccctccagaagcgctggctcgccgacagcggccacgtgcccatg
gacaaccccttcgacgcctccccgcacggcggggcgggcaccgatcccgagctgggcaca
ctggccggtcagggcttccactcgttcagcgtggccgacgtcgacggcgacggccgacag
gagatcgtctacggcgccgccaccgtggacgacgacggctcgctcctgtactcctcctac
gcctacggccctccggagagcgacgtggcgggcgagtacgtcaagctcggccacggcgac
gccatgcacgtaggcgacctggatccccggcgggagggcctggaggtctggacggtccac
gagggagccacgcacgcgccctacgggttcgcgatgcgcgacgccgccaccggagaggtg
ctcttcggcggatacaccggcacggacaccggccggggcatggtgggcgacatcgacccc
gacacccccggcctggaggcgtggtcctccatgccgcccggtgacgacgtcgaggccggc
ctgtggagcgccgacggcgagttcatgggcgaccggaccccgggcacgaacatgagcatc
cgctggtccgcggacatgaccacccagatcgtcgagggcatggcgacccccgacgtcacc
cagacgcccaggatcgaggactggaaccgcgggaccctgctcaccgccgagggaaccctg
accaacaacggcacgaagggcaaccccggactggtcgcggacgtgttcggcgactggcgc
gaggagatggtcgtgcgcaccgaggacagcacggcgctgaggatcctcaccagcaccgag
gtgaccgaccgcaaactgcacaccctgatgcacgacccgcagtaccgggtgggcgtggcc
gggcagcagagcggttacaaccagcccacctacccgggcttctacttcggctccgacatc
gactggtcgcgtgtccaggtgcccgaggcccactacccgaagccgtag
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