KEGG   Nocardia farcinica IFM 10152: NFA_43070
Entry
NFA_43070         CDS       T00207                                 
Symbol
nrdE
Name
(GenBank) putative ribonucleoside-diphosphate reductase alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
nfa  Nocardia farcinica IFM 10152
Pathway
nfa00230  Purine metabolism
nfa00240  Pyrimidine metabolism
nfa01100  Metabolic pathways
nfa01232  Nucleotide metabolism
Module
nfa_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
nfa_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:nfa00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    NFA_43070 (nrdE)
   00240 Pyrimidine metabolism
    NFA_43070 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nfa03400]
    NFA_43070 (nrdE)
Enzymes [BR:nfa01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     NFA_43070 (nrdE)
DNA repair and recombination proteins [BR:nfa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    NFA_43070 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN LAGLIDADG_3 Hint_2 PT-HINT Intein_splicing Hint Rhabdo_matrix Hom_end_hint AftA_C Vint
Other DBs
NCBI-ProteinID: BAD59156
NIH_Japan: nfa43070
UniProt: Q5YRN5
LinkDB
Position
complement(4464381..4467689)
AA seq 1102 aa
MLNLYGPDGKIQFDKDREAARQYFLQHVNQNTVFFHNLDEKLDYLVEENYYEPEVLDRYS
RAFVKSLFQQAYDKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVCMVALTLAAGD
EELARKLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFPAGTPVDTIDGPKPIESLRAGD
RVLSHDGSYATVEKLIENTNDQPLVSISHFGHKEPIRCTPEHPILVWTDRDVETLIDGDG
ADPFNGFVWLAAQDVHPSDFIVATAPLETRERRVFDLMNHVGEGTYEEVDGLIRKVNTDA
RHRNKQRHRQGFVAVTRYVEESYDLGLILGWYLAEGHVSKRSGVEDVRPTGVHFTLGANE
IERHVELGMAFKQVFGVDLVLHTNHSDHSTRMVCNSKIVASLLLSLAGTGYSTKRLAHEV
MTADEDFQRGLLVGLFRGDGCTTTGGMVLDLVNQELIDQVQLLLRRLGIVSVVRTYTNQA
GNPTGQVFVPGLPGTNEEFIFDVDKNLQNYTGRKGTKRTTYQVVHGRHVYGIRAVERTGE
TPRQVYNLHVEGTHTYTIRGAVVHNCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLS
NIREHGAPIKKIENQSSGVIPIMKLLEDSFSYANQLGARQGAGAVYLHAHHPDIYRFLDT
KRENADEKIRIKTLSLGVVIPDITFELAKKNEDMYLFSPYDVERIYGKPFADIDVTEKYY
EMVDDKRIRKSKIKAREFFQTIAELQFESGYPYIMFEDTVNRANPIAGKITHSNLCSEIL
QVSTPSEFNDDLSYAKVGKDISCNLGSLNIAKAMDSPDFAQTIEVAIRALTAVSDQTHIT
SVPSIEQGNQQSHAIGLGQMNLHGYLARERIHYGSDEGIDFTNMYFYTVVYHALRASNRL
AIERGTYFGGFPESKYASGEYFDKYTEQVWEPKTERVRQLFADAGVRIPTQDDWRELKAS
VMEHGIYNQNLQAVPPTGSISYINHSTSSIHPVASKIEIRKEGKIGRVYYPAPYMTNDNL
EYYQDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDLNKAQIYAWRKGIKTLY
YIRLRQMALEGTEVEGCVSCML
NT seq 3309 nt   +upstreamnt  +downstreamnt
atgctgaacctgtacggccccgacggcaagatccagttcgacaaggatcgcgaggcggcg
cgccagtacttcctgcagcacgtcaaccagaacacggtcttcttccacaatctcgacgag
aagctggactacctggtcgaggagaactactacgagcccgaggtgctcgaccggtacagc
cgcgcgttcgtcaagagcctgttccagcaggcctacgacaagaagttccggttccccacc
ttcctcggcgcgttcaagtactacacctcgtacacgctcaagaccttcgacggcaagcgc
tacctggagcgcttcgaggaccgcgtgtgcatggtggcgctgacgctggccgccggtgac
gaggagctggcccgcaagctcgtcgacgagatcatcgacggccgcttccagcccgccacg
cccaccttcctcaactcgggcaagaagcagcgcggcgagccggtgtcgtgcttccccgcc
ggcacccccgtggacacgatcgacggcccgaagcccatcgagagcttgcgcgcgggcgac
cgcgtgctctcccacgacggttcttacgcgaccgtcgagaagctcatcgagaacaccaat
gatcagccgctggtatcgatctcgcacttcggtcacaaggaaccgatccggtgcaccccc
gagcacccgatcctggtgtggaccgaccgggacgtcgagaccctgatcgacggcgacggc
gccgatccgttcaacggattcgtatggctggccgcccaggatgtgcacccgtccgacttc
attgtcgcgacagcaccgctggaaacccgcgagcgccgggtgttcgacctgatgaatcac
gtgggtgaaggcacctacgaggaggtcgacggcctgattcgcaaggtgaacaccgatgcc
aggcatcgcaacaagcagcgtcaccggcagggtttcgtcgccgtcactcggtacgtcgag
gagtcctacgacctcggcctgattctcggctggtacctcgccgaaggccacgtgtccaag
cgatccggtgtcgaggatgtgcggcccaccggcgtccatttcaccctgggcgcgaacgaa
atcgaacgccacgtcgagctgggcatggcgttcaagcaggtgttcggcgtcgatctggtg
ctgcacaccaaccactccgaccactccacccggatggtctgcaacagcaagatcgtcgca
tcgctgctgctgtcgttggccggcaccgggtacagcaccaagcggctggcgcacgaggtg
atgaccgccgacgaggacttccagcgcggcctgctggtcggcctgttccgcggcgacggg
tgcaccaccaccggcggaatggttctcgatctggtgaaccaggagctgatcgaccaggtg
caacttctgctccgtcggctcggcatcgtctcggttgtgcggacctacaccaaccaggcc
gggaatccgaccggacaggtcttcgtacccggcctgcccggcaccaacgaagagttcatc
ttcgacgtcgacaagaacctgcagaactacaccggtcgcaagggcacgaagcggacgacc
taccaggtggtgcacggccgccacgtctacggcatccgggcagtcgagcgcaccggggaa
accccgcggcaggtctacaacctgcacgtcgagggcactcacacctacacgatccgcggt
gccgtcgtgcacaactgcttcctgctgcgcatcgaggacaacatggagtccatcgggcgc
tccatcaactccgccctgcagctgtccaagcgcggcggcggtgtggcactgctgctgagc
aacatccgcgagcacggcgcgccgatcaagaagatcgagaaccagtcctccggcgtcatc
cccatcatgaagctgctcgaggactccttctcctacgccaaccagctcggcgcgcggcag
ggcgcgggcgcggtgtacctgcacgcgcaccaccccgacatctaccgcttcctggacacc
aagcgggagaacgccgacgagaagatccgcatcaagaccctctcgctgggcgtggtgatc
cccgacatcaccttcgaactggcgaagaagaacgaggacatgtacctgttctcgccgtac
gacgtggagcggatctacggcaagccgttcgccgacatcgacgtcaccgagaagtactac
gagatggtcgacgacaagcgcatccgcaagtcgaagatcaaggcgcgcgagttcttccag
accatcgccgagctgcagttcgagtcgggctacccgtacatcatgttcgaggacacggtg
aaccgggccaacccgatcgcgggcaagatcacccactccaacctgtgctcggagatcctg
caggtctccacgccctcggagttcaacgacgatctgtcctacgccaaggtcggcaaggac
atctcctgcaatctgggctcgctcaacatcgccaaggcgatggactcgccggatttcgcg
cagaccatcgaggtcgcgatccgggcgctgaccgcggtgtcggaccagacccacatcacc
tcggtgccctccatcgagcagggcaaccagcagtcgcacgccatcggcctcggccagatg
aacctgcacggctacctggcccgcgagcgcatccactacggctcggacgagggcatcgac
ttcaccaacatgtacttctacaccgtggtgtatcacgcgctgcgggcgtcgaaccggctc
gcgatcgagcgcggcacctacttcggcggattccccgagtccaagtacgccagcggcgag
tacttcgacaagtacaccgagcaggtgtgggagcccaagaccgagcgggtgcggcagctg
ttcgccgacgcgggtgtgcgcatccccacccaggacgactggcgtgagctgaaggcctcg
gtgatggagcacggcatctacaaccagaacctgcaggccgtgccgccgaccggctcgatc
tcctacatcaaccactccaccagttcgatccacccggtggcgtcgaagatcgagatccgc
aaggaaggcaagatcgggcgcgtctattacccggcgccctacatgaccaacgacaacctg
gagtactaccaggacgcctacgagatcggctacgagaagatcatcgacacctacgccgcg
gccacccagcacgtggaccagggtctgtcgctgacgctgttcttcaaggacaccgccacc
acccgtgacctgaacaaggcccagatctacgcctggcgcaagggcatcaagaccctgtac
tacatccgcctgcggcagatggcgctggagggcaccgaagtcgagggttgcgtgagctgc
atgctctga

DBGET integrated database retrieval system