Nostoc flagelliforme: COO91_05751
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Entry
COO91_05751 CDS
T05266
Name
(GenBank) SIG3.3.2, RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
nfl
Nostoc flagelliforme
Brite
KEGG Orthology (KO) [BR:
nfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfl03021
]
COO91_05751
Transcription machinery [BR:
nfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
COO91_05751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_Crp_2
HTH_24
HTH_3
KORA
HTH_17
HTH_23
Sigma70_ECF
HTH_Tnp_ISL3
HTH_Tnp_4
HTH_8
HTH_11
MarR_2
GerE
HTH_31
Xre-like-HTH
HTH_AsnC-type
Trp_repressor
HTH_37
Sigma54_DBD
HTH_28
AbiEi_4
DUF1492
Motif
Other DBs
NCBI-ProteinID:
AUB39753
UniProt:
A0A2K8SWM2
LinkDB
All DBs
Position
complement(5326145..5327011)
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AA seq
288 aa
AA seq
DB search
MRSPTTGGYAIAAEFKSEELIVDLLNKRGAMPTTTTNELKHEIWQLLREYQQCRSENVRN
KLVKLNFGLVRKEAHYWTNQCHETYDDLLQVGCLGLIRAIEKFELSKGHAFSSYALPYIR
GEIQHYLRDKGVTVRIPRKWLALQQQAIGVSRSWREKHNRQPTDSELATALEISPNEWQE
IKLAWVNRAPLSLDVPIQDGEEGSTCLGELVPDPHYRSFQLAQEDQLRLQQALVQLEQRT
RDVLECVFLQDLTQKQVAEHLGISVVTVSRRVKKGLDLMKELMGVAED
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgcgatcgcctacgacgggcgggtacgccatcgcagctgagtttaaaagtgaggaatta
attgttgatttacttaataaacgcggtgctatgcctaccacaaccaccaatgaactaaaa
catgaaatttggcagttgttgcgagaatatcagcaatgtcggtcagaaaatgttcgcaat
aagctggtaaaactcaattttggacttgtgagaaaagaagctcactactggacgaatcaa
tgtcatgaaacctacgatgatttgctccaggttggatgtttgggtttaatcagggcaatt
gaaaaatttgaactttccaagggacatgcttttagttcctatgctcttccttatattcgg
ggtgaaattcaacactatctccgagataaaggtgtcaccgtgcgaattcctcggaagtgg
ttagcactgcaacagcaagcaataggagtgtcacgttcttggcgtgaaaagcataatcgc
caaccaacagactcggaattagcaacagcattagaaatttctccaaacgaatggcaagaa
attaaattagcatgggtaaaccgcgctcccttgagtcttgatgtgccaatccaagatgga
gaagaaggctctacctgtttgggagaattggttccagatcctcactatcgcagctttcaa
ctagcacaagaagaccaacttcgcttgcaacaagcattggttcagctagaacaacgcacc
cgcgatgtattggaatgtgtgtttttgcaagatttgacacaaaaacaagttgcagaacat
ctgggaattagtgtagtaacagtttcccgtagagttaagaaaggtctggatttgatgaaa
gagcttatgggtgtggcagaagattga
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