Nocardia farcinica NCTC11134: ERS450000_04237
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Entry
ERS450000_04237 CDS
T04524
Symbol
rnhA
Name
(GenBank) Ribonuclease H
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ERS450000_04237 (rnhA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfr03032
]
ERS450000_04237 (rnhA)
Enzymes [BR:
nfr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
ERS450000_04237 (rnhA)
DNA replication proteins [BR:
nfr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
ERS450000_04237 (rnhA)
Prokaryotic type
Elongation factors (bacterial)
RNase H
ERS450000_04237 (rnhA)
Elongation factors (archaeal)
ERS450000_04237 (rnhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RVT_3
Motif
Other DBs
NCBI-ProteinID:
CRY81111
UniProt:
A0A0H5PF00
LinkDB
All DBs
Position
p2:complement(764594..765139)
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AA seq
181 aa
AA seq
DB search
MIIVSTDGSCLRNPGGAIGWAWVAHQGGASHSGGAATGTNQIAELRAVLEAILAHPGPEP
LLIESDSLYAIKCASEWINGWRGNGWRTSSGGPVKNVELIKQIDRAIARRPGPVRFRWVR
GHVGNYFNERADALAGEAARKAAAAPAEPASEIAAAPVAVPQDARTSGKAVASAAQTLTL
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtcagcaccgacggatcctgcctgcgcaaccccggtggcgccatcggctgg
gcgtgggtcgcccatcagggcggcgcctcgcacagcgggggagccgccaccggcaccaat
cagatcgcggaactgcgcgccgtgctcgaggcgatcctcgcccatcccggcccggaaccc
ctgttgatcgaaagcgattcgctctacgccatcaagtgcgcctcggagtggatcaacggc
tggcgcggcaacggctggcgcacctccagcggcggccccgtgaagaacgtggagctcatc
aagcagatcgaccgcgccatcgccaggcgtcccggcccggtgcggttccgctgggtgcgc
ggccacgtcggcaactacttcaacgagcgcgccgacgcgctcgccggcgaagcggccagg
aaggccgccgccgcacccgccgagcccgcgagcgagatcgccgcggccccggtcgcggtg
ccccaggacgcgcggacctcggggaaggcggtcgcctcggcggctcagacgctcacgctg
ttctga
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