Candidatus Nanosynbacter featherlites: FBF37_03185
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Entry
FBF37_03185 CDS
T08029
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
nft
Candidatus Nanosynbacter featherlites
Pathway
nft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FBF37_03185 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nft03019
]
FBF37_03185 (rny)
Messenger RNA biogenesis [BR:
nft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FBF37_03185 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
KH_PNO1_2nd
HDOD
Ribosomal_S18
KH_2
KH_NusA_2nd
KH-I_KHDC4-BBP
AIF-MLS
Motif
Other DBs
NCBI-ProteinID:
QCT42446
UniProt:
A0A4V1GDN9
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All DBs
Position
complement(617065..618555)
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AA seq
496 aa
AA seq
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MAGIVIGALVGASLGAGALYGYQTVRRSQAKSQIDKDLANAKTKASDIVLKAKDEALKIE
NERRREWQKTENRLADREKTLDNKLEELDRRSEKLRAHEDEIDDLKNEIRQIRTRQQEKL
EKIAGLKKKDAAEKLMQMTERDIRDDLTKLVAKLQHEAMDDAEERAQTILLTAMERMSSE
VTAERTVTAVKLTDDEMKGRIIGKEGRNIQALQRATGVDILVDDTPGMVVLSSFDPIRRQ
VARLSLEMLMKDGRIHPARIEEVVAKAQKQIDKEVKQAGEDAMREAGVVGIPKEMLRLLG
ELKFRTSYGQNVLKHSTEMAQMAGMIAEEIGADVRISKIATLLHDSGKAVTHKIEGKHHH
IAAELARKYGMDERIAHAIEAHHDDIEATTPEALVVRVVDAASAARPGARNISAENFAER
MRDLENVATSFEGIDKAYAISAGREVRVIVKPEKIDDLSAIKLSRDIATKIESTMQYPGT
IKVNVIRETRAVEFAK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaattgtcattggcgcacttgttggggccagtttaggcgcgggcgcgctctat
ggatatcaaacagtacgtcgttcacaggcgaagtcgcaaattgataaagatttggcgaac
gcaaaaaccaaagcgagtgacatcgttctcaaggcaaaagatgaggcactgaaaattgag
aatgagcgtcgtcgagagtggcaaaaaacggaaaatcgtctggcggaccgtgaaaagacg
cttgataacaagcttgaagagctggaccgtcggtcagaaaaattacgggcgcacgaagat
gagattgatgatctgaaaaatgagattcggcaaattcgtactcgtcagcaggaaaaattg
gaaaaaattgctggcctgaaaaagaaagatgcagccgaaaaattgatgcagatgactgag
cgtgacattcgtgatgacctcaccaaattggtcgcaaaattgcagcacgaggccatggac
gatgctgaagagcgggctcagactattttactcaccgccatggagcgaatgagcagtgaa
gtaacagctgagcgcaccgtgacggcggtgaaactgactgatgatgagatgaaaggccgc
atcatcggtaaggaaggtcgtaatattcaggcgttgcagcgtgccactggtgtcgacatt
ttggtagacgatacacctggtatggtggtgctgtcgagctttgacccaattcgtcgccag
gttgcacgtttgagtttggagatgctgatgaaagatggacgcattcatccagcgcgcatt
gaggaagttgttgccaaggcgcaaaaacagattgacaaagaagtcaagcaggctggtgaa
gatgccatgcgtgaagcgggtgttgttggtattccaaaagaaatgctgcgcctgttgggt
gaattgaaattccggacctcgtatggtcagaatgtgctgaagcattctactgaaatggcg
cagatggcggggatgatcgctgaggaaattggcgctgatgttcgtatatcaaagatcgcg
acgttgctgcacgactctggtaaggcagtgacgcacaaaattgaaggtaaacatcaccac
attgcggcagaattggcgcgcaaatacggcatggatgagcgaattgcacacgctattgag
gcacaccatgacgatattgaagcgaccacaccagaggcattggtggttcgcgtggtagac
gccgcttcggcagcacggccaggcgcacgtaacatctcagcggaaaactttgctgaacgt
atgcgcgacttggaaaacgtagccaccagctttgaaggcatcgataaggcctatgcaatt
tctgccggacgagaagtgcgggtgattgtcaagccagaaaagattgatgacttgagtgct
atcaaattgtctcgtgatattgccaccaagatcgaatcaaccatgcaatatccaggtact
atcaaagttaatgttatccgcgaaacgcgggcagtggagtttgcgaaataa
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