Nothobranchius furzeri (turquoise killifish): 107373342
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Entry
107373342 CDS
T05163
Symbol
setd1b
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu00310
Lysine degradation
nfu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107373342 (setd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107373342 (setd1b)
Enzymes [BR:
nfu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
107373342 (setd1b)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
107373342 (setd1b)
HMT complexes
COMPASS/SET1 complex
107373342 (setd1b)
COMPASS/SET1 complex (yeast)
107373342 (setd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
107373342
NCBI-ProteinID:
XP_015796978
UniProt:
A0A1A8AKE3
LinkDB
All DBs
Position
sgr02:51575908..51591023
Genome browser
AA seq
1807 aa
AA seq
DB search
MSKPGERNRLNEDHGRKQSSSLANGMDTHPVCGSAEKRSHHWRSYKLIIDPALKKGSHKL
YRYDGQTFSMPNPGIPPVEIVRDPRIGRLWTKYKETDLPVPKFKIDECYVGPVPPKEVTF
ARLNDNIREGFLTDMCKKFGDIEEVEILYNPKNKKHLGIAKVVFENVKSAKVAVQSLHNT
SVMGTIIHVELDPKGENRLRYFQLLMNGSYTPRTLPVGVEETREVSPRSLAEALLACEPI
RRLSESSISSVGGALPPSSSTTPLSLETGYSSLRQDTPQSQGTPHTPRQPGTPFSQDSSF
SSRQSTPAYQSSRPESSGGYKSRRHESKFQDAYNRRPERPQYRSNMYRSTSSEQAPSKQH
QLTPPEPPPSTTSFNYSAPPPTTPNFKSAFSPYQAPLPPAFPPSEPPFHHPSQREGEYLL
PPQPPLAAPTDFLPVKERPETPPIPEPPPEPSPHPTTPPPQTPEDCPSPGSPVLDSERNS
LDSRIEMLLKEKRTKLLPFLEERDSDNEVRMEGSPISSSSSQLSPIPPYTGSSQGGQQNS
RPPSMGLEDISPTPLPDSDDDEPVPGMSSLVGRVGSPVHEKSKTDLKDGPFGCHSPADKT
DTGQQSSGEDMEISDEELPGAPITSGDCDVINDDLSSMQPMSMHPASYHHMQAGFAIPPH
LLSHHSTIAGHPAHLAAHPGVHPHMIHPMSPYTPSMIQLMGLMNCVPWERWSTVPMSFQM
QQQMLSRMAQTRGPYQYPHFMDGGTAGPFGGHYTPVSMDATPACSTGAPGHEWHHPSLPK
FNPTVPPPGYEGKKEDPHKATVDGVLLVIVKELKAIMKRDLNRKMVEVVAFRAFDEWWEK
KEHSAKTSLTPVKGAEGKEEEKPKPKETLGSSLLENWNKAEGLGFEGMGLGMGLRGAIRL
PSFKVKRKDPPETAPAGDNKRARPSTPVDDELEDEDRDRDPAELPSGDSKVDSDGTAAKR
RHSRPLELDSEGEEEMDTSGKEEESLSELEEEEADETTVVDGLSSGKESDAEEDKEEEAG
GSSSDSTSSDSSDDEAETSASFKASSESSVESSDSSAETSEFSEYELSSEEEEDEEREPE
DKHAQVADTSSSSSSSSSSSSDEDDRDSKPPSPTVAGREHVKEELSPKTKRRPPSPPLED
VKPPSPRGIREERWDGVITAVKLEPPEHVTNLRPPTPTGALPDSDQEAKTKGKAEPEDIP
CTPALLVPSHPNAPASTSLKHLPLPPHPTVESRSLLHPPPGPLPDFPQRPRLPTDEDIPR
TPGRDLMERARSLGKSQSTDTIPNTPGSDAPLTGSSLLLSSPHIPGSPFSYPSQSPVLSA
GVPRTPGRDLTFTPVFPDPAALALNRKSLDEGQVFKEPPVSALPNQVLPASTEHTATVPE
DLPSDLSADVPALSEATSSKKKAGRSKLKKTPAVSASESLEFSSESTDRPQESSLRDLSL
QMTSVKPPKHASLDFREGEDDSQTRLPLDDDFLPYKKEASVVSKPVRRSRRGWEELLLGT
LSPVTTPPRSYFSPRSDFEEVTILYDIWNEGIDEEDIRLLQVTYDKMLQQDNVNDWLNDT
LWVNHPPTNIPGVKKKRQDDGIRDHTTGCARSEGYYKIDKQDKIKYLESSRLQSEEPPVD
TQGMSIPAQVHASSRAGSERRSEQRRLLSSFACDSDLLKFNQLKFRKKKIRFCKSHIHDW
GLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEEEGIGSSYMFRVDHDTIIDATKCGN
FARFINHSCNPNCYAKVITVESQKKIVIYSRQPINVNEEITYDYKFPIEDEKIPCLCGAE
NCRGTLN
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccaggcgagaggaatagattgaacgaggaccatggcagaaagcagagttca
agtttggcgaacggcatggacactcatcccgtctgcggctcggcggagaagcggagtcac
cactggagaagttacaagttgatcatcgacccggcgctgaagaagggatcacacaaactg
tatcgctacgatggacagactttcagcatgccaaaccctgggataccaccggtggagatc
gtccgagacccgaggatcggtcgtctctggaccaagtacaaagaaacggacctaccggtg
cctaagtttaagatcgatgagtgctacgtcggccccgtgcctccgaaagaggtgacgttc
gcccggctgaacgacaacatcagggagggatttctcacggacatgtgcaaaaaattcgga
gacatcgaggaggtcgagatcctgtacaatccgaagaacaaaaagcacctgggaatagct
aaagtggtttttgagaatgtcaaatccgccaaggtggctgttcagtcgctgcacaacacg
tctgtgatgggaaccatcatccacgtggagctggacccaaaaggtgagaatcgcctgagg
tacttccagctcctgatgaatggcagctacactccaaggacgctgcctgttggtgtagag
gagacccgggaggtttccccgcggagcctggctgaagcgttactggcctgcgagcccatc
cgcaggttgtctgagagcagcatctcctctgtgggaggagcgctgccgcccagcagctct
accactcccctgagcttggagaccggctactccagcttaaggcaggacaccccccagtcc
cagggaacccctcacaccccacgccagccaggcacacccttctctcaggactctagtttc
tccagtcggcagtccacgcctgcataccagtccagccgtcccgagagctccggaggctac
aagtctcggaggcacgagagcaagttccaagatgcgtacaatcgcagaccagagaggccg
cagtatcgcagcaacatgtatcgcagtacgtcgtctgagcaggctccttcaaaacagcac
cagctcaccccgcctgaacctccaccttccaccacctccttcaactactccgcgcctccc
cccactacgcctaacttcaagtctgccttctcaccctaccaggcacctttgcctcccgcc
ttccccccatctgagccaccttttcatcacccatcccaaagggagggtgagtacctccta
cctccgcagcctccactggcagctccaactgactttttacccgtcaaggagagaccagaa
actcctcccatcccagagccgccacctgaacctagtccccatccgactacccctcccccc
cagaccccggaggactgcccctcgcccggctctccggtgctggactcggagcgtaacagc
ctggattctcgcatcgagatgctcctgaaagaaaaaaggacaaaactgctgccgttcctg
gaggagcgggactcggacaacgaggtgcgcatggagggaagtcctatttcctcctcgtcc
tcccagctgtccccgatcccaccttacactggtagctctcagggtggccagcagaattcc
cgtcccccaagtatgggcttggaggacatcagtccaaccccactgccagactcggatgat
gacgagcctgttcccgggatgtcctcattggttggaagagttggctctcctgtccacgag
aagagcaaaactgacctcaaggacgggccctttggatgccacagtcccgctgataaaaca
gacacgggtcagcagtcatcaggggaagacatggagatctccgatgaggagttgccagga
gctccgatcaccagcggagactgtgacgtcatcaacgacgacctgtcttcaatgcaaccc
atgtccatgcaccctgccagctaccaccacatgcaagccggcttcgccatccctccccac
ctgctgtcccatcactctaccatcgcagggcatccggctcacctggccgctcacccagga
gttcacccccacatgatccatcccatgagtccttacaccccgagcatgattcagctgatg
gggctgatgaactgcgtgccgtgggaacgctggagcacggtccccatgtccttccagatg
cagcagcagatgttgagtcgcatggctcagaccagagggccctatcagtatccgcacttc
atggacggaggcactgccgggcccttcggaggacactacacgcctgtttctatggacgcc
acgcctgcctgcagcacaggagcccctggacatgagtggcaccatcccagcttacccaag
ttcaaccccaccgttcccccgccgggctacgaggggaagaaggaggatccccacaaggcc
accgtggacggggtgctgctggtcatcgtcaaagagctgaaggccatcatgaagagggac
ctgaaccgcaaaatggtggaggtggtggctttcagggccttcgatgagtggtgggagaag
aaggaacattcagcaaagacatctttgactccagtcaaaggtgcagagggaaaggaagaa
gaaaaacccaaacccaaggagacgctgggttctagtctgcttgagaactggaacaaggcc
gaagggctcggctttgaagggatgggtctgggaatgggcttaagaggagccatccgactg
ccctccttcaaggttaaaaggaaagacccacctgagacggcgccagcaggcgacaacaag
agggcgcgaccttccacgccggtggacgacgagctggaggatgaagaccgggatcgagac
ccagcagagctcccctctggagattctaaagtggacagcgacggtacggcggcaaagcga
cggcactcacgaccgctcgagctggacagcgagggggaagaggagatggacacgtcaggg
aaggaagaggagtcgctgtccgaattggaggaagaggaggctgatgaaacgacggttgta
gacgggctgtcgtcgggcaaggagagtgatgccgaggaggacaaggaggaagaagcagga
ggctcgtccagcgacagcacatcttcagactcatctgatgacgaagccgaaacctccgcc
tccttcaaggccagctccgagtcgtcggtggagagctccgactcctcggcggaaacctca
gagttttctgagtacgaattaagctcagaggaggaagaagacgaagagagagagccagag
gacaagcacgcccaagtggctgacacctcatcgtcttcttcctcgtcctcgtcgtcttct
tctgatgaggacgacagggacagcaagccaccgagtcctacggtagcaggcagggagcac
gtgaaggaggaattgagcccaaagaccaaacgcagacctcccagtcctcctctagaggac
gtgaagccaccttcacccagaggtatccgagaggagcggtgggatggagtcatcaccgca
gtgaagctagagcctccagaacacgtgacaaacctccgcccgcccacccctacgggtgcg
ctgcccgacagcgaccaggaagctaaaaccaaaggtaaagccgagcctgaagacattccc
tgcacccccgctctactagttccatcccatccaaatgcacctgcctccacgtcactaaag
catctccctctacctccacacccgacggtagaaagccgctccctactccatcctcctccc
ggccccttgcctgacttccctcagcggcccaggcttcccacagacgaggacatcccccga
acgccggggcgtgacctgatggagcgcgctcgtagtctgggtaaatcccagagtaccgac
accattcccaacacgcccggcagcgacgcccctctgactggtagcagcctgctgctcagc
tccccccacatccccggtagtcccttttcttacccctcacagtcccctgtcctcagtgcc
ggagtgcctcgtacgccagggagagatttaactttcacccctgtcttccccgaccctgca
gcactcgcactaaacaggaagagcctggatgagggacaggtgtttaaggagccaccggtc
agcgctctgcctaatcaagtcctgcccgcctccacagaacatacggccaccgtgccagaa
gatctaccctccgatctctctgcagacgtccctgcgctttcagaggccacctcgtcaaag
aagaaggccggacggtcaaaactaaaaaagactccagctgtttctgcgtctgagtcttta
gagttctcgtccgagtccacagatcggcctcaggaatcctctctgagggacctgtccctc
caaatgacatctgtcaaacctcccaaacatgccagcctggacttccgggaaggagaggat
gattctcagacccggttacctctcgacgatgacttcctcccctacaagaaggaggcatct
gtggtttcaaagccagttcggagatcgaggcgaggctgggaggagctgctcctgggcacc
ctgtctccagtcaccactccgccacggtcgtatttcagcccgcgctctgatttcgaggag
gtgaccatcctgtatgacatctggaacgaaggcatagatgaggaggacatacggcttctg
caggtcacgtatgacaagatgctccagcaggataacgtcaacgactggctcaacgacacg
ctctgggtcaaccatcctcccaccaacatccccggtgtgaagaaaaagcgacaagacgat
ggcatcagggatcacacgacgggctgcgcgcgaagcgagggatactacaagatagacaag
caggacaagatcaagtacctggagagctctcggctgcaatcggaggagccgccagtcgat
acccagggaatgagcattcctgcgcaggtccacgcctccagcagagccggatcggagcgg
cgctcagagcagcgacgcctgctgtcatcgttcgcctgtgacagcgacctgctcaagttc
aaccagctgaagttccgtaagaaaaagatccgattctgcaagtcgcacatccacgactgg
ggtctgtttgctatggagcccatcgctgctgatgagatggtgattgagtatgtgggacag
aacatcagacaggtgatcgctgacatgcgggagaagcgctacgaagaggagggcatcggt
agcagctacatgttccgggtggaccacgacaccataatcgacgccacaaaatgcggcaac
tttgcccgtttcatcaaccacagctgcaaccccaactgttatgctaaagtcatcacagtg
gagtcccagaagaagatcgtgatctactccaggcagccgatcaatgtgaacgaggagatc
acgtatgactacaagttccccatcgaggacgagaagatcccatgtttgtgtggagcagag
aactgcagagggacgctcaactag
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integrated database retrieval system
