KEGG   Nothobranchius furzeri (turquoise killifish): 107376110
Entry
107376110         CDS       T05163                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107376110 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nfu03041]
    107376110 (cdc5l)
   03400 DNA repair and recombination proteins [BR:nfu03400]
    107376110 (cdc5l)
Spliceosome [BR:nfu03041]
 Complex B
  Other components
   Prp19 complex
    107376110 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    107376110 (cdc5l)
DNA repair and recombination proteins [BR:nfu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    107376110 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 107376110
NCBI-ProteinID: XP_015800533
UniProt: A0A1A8VHS7
LinkDB
Position
sgr03:43080549..43096843
AA seq 810 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDNEEEVGDDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIHVQKKRKKKRGVDYNAEIPFEKKPAPGFYDTSMEQYDALEPHFK
RLRQQHLDGELRNESEERDRKKDKQKMKKKKESDLPSAILQTSGVAEFTKKRSKLVLPAP
QISDAELEEVVKLGVASEVARQAAEESEGGNSASSTLLSEYSITNNMTTGLRTPRTPAAQ
DRILQEAQNLMALTNIDTPLKGGLNTPLHESDFSGVTPQRQQVQTPNTVLSTPFRTPGPG
QASDGMTPLAGGGMTPRGTPGLTPGRTPLRDKLNINTEEQLADSTFTKHLHKESLQQLRQ
GLMSLPVPKNDFEIVLPENAEKELEETEMETGYIEDSADVEARKQAQRDAEREKELKLRH
TAVQRSLPRPTEVNESVLRPASMEPLSDLQIAEELIKQEMITMLHHDCLHHPSVNMANQL
QRGKTKGPTSTSNNASHISYLETHSYKPVSTEEMEQATAILAAEMDVVKAGMGHGDLSLE
AYTQVWEECYGQVLYLPGQSRYTRANLASKKDRIESLEKKLEVNRGHMTAEARRAAKLEK
KLKILLGGFQSRALGLLKQHNELYEQVEQAATELQTFSQLKKQEDLAIPRRQEALREDVE
RQMERERELQQRYGELLMERESLLNSTQKF
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgccgcgaattatgataaagggtggcgtttggcgcaacactgaggatgagatcctcaag
gcagcggtgatgaaatatgggaagaaccagtggtctcgtatcgcctccctgcttcaccgc
aaatctgccaaacagtgtaaagccagatggtacgagtggttggaccccagtatcaaaaaa
acagagtggtccagagaagaggaggagaagttgcttcacttggccaagctgatgccgact
cagtggaggaccattgctcccatcattgggcgcactgctgcccagtgtctagagcactat
gaatacctgctagataaagcagcacagagagacaacgaggaagaggtgggagatgatccc
aggaagctgaaaccaggagagatcgacccaaaccctgagactaaacctgccagacctgac
cccgtggacatggatgaagatgagctggagatgttgtcagaagccagagctcgtctggcc
aacacgcagggcaaaaaagccaagaggaaggccagagagaaacagctggaggaagccagg
cgcctggctgctctgcagaaacgcagagagctgagagcagcaggaatccacgttcagaag
aagagaaagaagaagagaggagtggactacaatgctgaaatcccctttgaaaagaaacct
gcaccaggtttctatgacaccagcatggagcagtacgatgccctggagccacactttaaa
cgactcaggcagcagcacttggacggggagctacgcaacgagtctgaggagagggaccga
aagaaagataaacagaagatgaagaagaagaaagagagcgatctgccatcagctatcctg
cagactagcggagtggcagagttcaccaagaagcgctccaaactggtgttacccgcccca
cagatcagtgatgcggagttagaggaggtcgtgaaactgggagtggcaagtgaggtcgcc
cgccaggctgctgaggaaagcgaaggtgggaactctgcttcctccaccctcctgtctgag
tacagcatcaccaacaacatgacaactggactacgaaccccacgcacccctgctgcacag
gacaggatcctgcaggaagcccagaacctgatggctctgaccaacatagacacgccgctg
aaggggggtctcaacaccccgctgcacgagagtgacttcagcggcgtgacgcctcagagg
cagcaggtccaaacaccaaacactgttctcagtacaccgttcagaactcctggacccggt
caggcctcagatgggatgacgcctctagctgggggtgggatgactccacgtggtactcca
ggtttgacgcccggccggacgccgctgagagacaaactcaacataaacaccgaggagcaa
ctggctgactcaacattcaccaaacatctacacaaggaaagcctgcagcagctaaggcaa
gggctgatgtcacttcctgtccctaagaacgactttgaaattgttcttcctgaaaacgca
gaaaaagaacttgaagaaacggagatggagacgggatatatcgaggactctgcagatgtg
gaggcacgcaaacaggctcagcgggatgcagaacgggagaaggagctgaagctacggcac
acggcagtacagaggagtctccccagacctactgaggtaaatgagtctgtcctccgtccc
gcctccatggagccactctctgacctccagatcgcagaggagctcatcaaacaggaaatg
atcaccatgctgcaccacgactgcctccaccatccatcagtcaacatggccaatcagctg
cagcgtggtaaaaccaaaggccccacgtctacgtccaacaacgcctcacacatctcctac
ctggaaacccactcctacaagccagtcagcacagaggagatggagcaggcaacggccatc
ctggcagcggaaatggacgtggtgaaagcaggaatgggtcatggtgatctcagcttggag
gcctacactcaggtgtgggaggagtgctatgggcaggtgttgtacctacctggtcagagc
aggtacaccagagccaacctggcttcaaagaaagatcgaattgaaagtctggagaaaaaa
ctagaggtgaaccgtggtcacatgacagctgaagctcggcgagcggctaaactagagaag
aaactgaagatcctgctgggaggttttcagtccagagccctgggcctcctgaagcagcac
aatgagctttacgaacaggtggagcaggcagccacggagctccagaccttcagtcaactg
aaaaaacaagaggacctcgccattcccaggagacaggaggctttgcgggaagatgtggag
aggcagatggagagagagcgagaactccagcagcgatacggagagctcctgatggagagg
gagtcgctgctcaacagtacgcagaaattctga

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