Nothobranchius furzeri (turquoise killifish): 107378316
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Entry
107378316 CDS
T05163
Symbol
colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu00310
Lysine degradation
nfu00514
Other types of O-glycan biosynthesis
nfu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107378316 (colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
107378316 (colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nfu01003
]
107378316 (colgalt1)
Enzymes [BR:
nfu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
107378316 (colgalt1)
Glycosyltransferases [BR:
nfu01003
]
O-Glycan biosynthesis
O-linked Gal type
107378316 (colgalt1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
107378316
NCBI-ProteinID:
XP_015803940
UniProt:
A0A1A8VBE7
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Position
sgr05:2282361..2295113
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AA seq
619 aa
AA seq
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MIHKRVAMQEVSVLRAAQLPLLLLLLCSSPGRAYFAEERWSPESPLLAPRVLLALICRNS
EHSLPYFLGTIERLNYPKDRMALWVATDHNEDNTTVILKDWLLKVQKLYHNVEWRPKEEP
RRHRDEDGPKHWTDLRYEHVMKLRQVALESAREMWADYFMLADCDNLLINPDVLWMLMQE
NKTIIAPMLESRAAYSNFWCGMTSQGYYKRTPAYIPIRKQGRKGCFAVPMVHSTFLIDLR
KEASRQLAFHPPHPDYSWAFDDIIVFAFSARMADVQMFVCNKETYGFFPVPLRSHNTLQD
EADSFLHTLLEVNVRNSPVMPSKYIRVPKKQPDKMGFDEVFMINLEKRADRRERMLRALH
EQGISCKITAAVDGKAMNVSEIHTMGIHMLPGYSDPYHDRPLTKGELGCFLSHYNIWKEI
VERRLQTSLVIEDDLRFEVFFKRRLMNLMSEVEQEGLDWDLIYIGRKRMQVDHPEKAVPN
VHNLVEADYSYWTLGYMMSLQGAEKLLKAEPLKKVLPVDEFLPIMYNKHPISDYMEQFEN
RNLKAFSAEPLLVFPTHYTGDPGYISDTETSTVWDNDEIRTDWDRARSGKTREQAKISSE
AQNSDVLQSPLDSTARDEL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgatccataagcgcgtcgccatgcaggaggtgtccgtgctccgcgctgcccagctcccc
ctgctcctgctcctgctctgctcctctcctggccgggcttacttcgctgaggagcgctgg
agccccgagtctcctctcctcgctccccgggttcttctcgccctcatctgcagaaactcc
gaacactcgttgccttatttcctgggaactattgagcgcctcaactaccctaaagaccgc
atggctctttgggtagcaacagatcacaacgaggacaacaccacggtgattctgaaggac
tggcttttaaaagtgcagaaactttaccataatgtggagtggaggccaaaagaagagcct
aggcgtcacagggatgaagatggtccaaaacactggacagatcttcgttatgagcatgtc
atgaagcttcggcaagttgccctggagtctgctcgggaaatgtgggcagactacttcatg
ttagcggactgtgataacctcctcatcaatcccgatgttctctggatgctcatgcaagag
aataagacgatcatcgctccaatgcttgaatcccgagcagcttattccaacttctggtgt
ggaatgacatctcagggctactacaagcgcacccctgcctacatacccatcaggaagcag
gggaggaagggctgctttgctgttccaatggttcactccacattcctaatagacctcagg
aaagaggcatcgaggcagctggccttccacccaccgcatccagactacagctgggccttt
gatgacatcattgtgtttgcgttctctgctcggatggcagatgttcagatgtttgtatgt
aacaaagagacctacggttttttccccgtaccactccgctcccacaacactttgcaagat
gaagctgacagcttcttgcacaccttgttggaagttaatgtgagaaattctcctgtgatg
ccttccaaatacatacgtgttcctaaaaaacaacccgacaaaatgggctttgatgaggtg
ttcatgataaacctggagaagcgagccgaccgtagagaacgaatgctgagagccctccat
gagcagggcatctcgtgtaagatcactgcagcagtagacgggaaagcaatgaacgttagt
gagattcatactatgggtatccatatgctcccggggtacagcgacccgtaccatgatcga
ccactgacaaagggagagctgggctgcttcctttcacactacaacatctggaaagagatc
gtagagaggcgtctgcagacttctctggtgattgaagacgacctgcggtttgaggtgttt
ttcaaacgccgcttgatgaacttgatgagtgaggtggagcaagaaggactggattgggat
ctaatctatattggtaggaagcgaatgcaggtggaccacccagagaaagcggtgccaaat
gtacacaacttagtggaagctgactattcctattggacactgggatatatgatgtcacta
cagggtgctgagaaacttttgaaagcagaaccgctgaagaaagttttgccagtggatgag
tttcttcctatcatgtacaataagcatcctatctctgattacatggaacagtttgaaaac
aggaacctgaaggcgttttctgcagagcctcttctcgtgtttccaactcactacacggga
gacccaggctacatcagcgacactgagacctccaccgtgtgggacaacgatgaaatccgc
acagactgggacagagcccgctcaggaaaaactcgggagcaggctaagatcagcagcgag
gcccagaactccgacgtgctccagtcccctttagacagcacggcacgggacgagctttga
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