Nothobranchius furzeri (turquoise killifish): 107383447
Help
Entry
107383447 CDS
T05163
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3-like isoform X1
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107383447
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfu02000
]
107383447
Transporters [BR:
nfu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
107383447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
MOR2-PAG1_N
Motif
Other DBs
NCBI-GeneID:
107383447
NCBI-ProteinID:
XP_015811549
UniProt:
A0A9D2YJH1
LinkDB
All DBs
Position
sgr09:22882013..22889723
Genome browser
AA seq
442 aa
AA seq
DB search
MKDERGREMSREGRKTRDPTRDRDRGHWASKIEYALVVAGNVVGLGNVWRFPYLCYKNGG
GAFLVPYTVFAVVFGIPLFLLETSMGQYTQGGFITCWRKICPLAQGIGYGFFVMKLYDFC
YVLVQVWAMFYLVFSFSAHLPWTSCDNTWNTENCLELQFFISPNITANLTNTTSAATEFW
EQRVLQMSSGIEELGSLSWELALCLLASWMFCFFSISKGIRSSGKVAYFTATFPYLMLLI
LLIRGLTLPGAWDGIYYYLYPDITHLANLKVWIEAGSQVLFSYCLTTGTLNVLSSYNRYN
NNCYKDCFWLCLLNSGTSFIAGFVVFSVLGFMAQKQGVTVDVVVDSGPGLAFIAYPQATA
LMPLPQFWSVCFFLMLVLLTVDTHFVFVESFITTVTDMFPKLFRVPVKRQILVLLVCLSN
FCLHLSLVTQVSSWILTESIKN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgaaagaggacgtgagatgagcagagagggaagaaagacgcgggacccgacg
agggacagagacaggggacattgggccagtaaaatagaatatgctttggttgttgcaggg
aatgtggtgggcctgggaaatgtctggaggtttccttatctctgctacaagaatggtgga
ggtgcctttttggtcccatacactgtgtttgcggtggtgtttgggatacctctgttcctt
ttggagacttcaatgggtcagtatactcagggaggattcattacctgctggaggaagatc
tgcccactggcacaaggaatcggatatggatttttcgtgatgaaactttatgacttctgc
tatgttctggtccaagtctgggctatgttctacctggtgttctccttcagtgcccatctc
ccctggaccagctgtgacaacacctggaacacagaaaattgtctcgaacttcagtttttc
atttcaccaaacataacggcaaatcttaccaacaccacctctgcagcgactgagttctgg
gaacagagagtactacaaatgtcatcaggcatcgaagagctgggcagcttgagctgggag
ctggccttgtgtctcctggccagctggatgttctgtttttttagtatttctaaaggaatc
cgatcttctggaaaggtagcatattttacagccaccttcccttatttgatgctcctcata
ctactgatcagaggtttgactctacctggagcgtgggatggtatttactattacttgtat
cctgatataactcacctggccaacctcaaggtgtggatagaagcaggatcccaggtactt
ttttcctactgtctaaccacaggaaccctaaatgttctgagcagctacaacagatacaac
aacaactgttacaaggactgcttctggctctgtctgctgaacagtggaaccagtttcatt
gctgggtttgtggttttctctgtactgggattcatggctcagaaacaaggagttactgtg
gacgttgtggttgattcaggtccaggtttggcctttatcgcttaccctcaggctacagcc
ttgatgcctttaccacagttctggagcgtctgcttcttcctgatgctggttcttctcact
gtcgacacacattttgtgtttgtggagagtttcatcaccacagtgactgacatgtttcca
aagctgtttcgtgttccagtgaagcgacagatcttggtcctcttggtctgtttgtccaat
ttctgcttacatctgagtttggttactcaggtgagctcatggatcctcactgaatccata
aaaaactga
DBGET
integrated database retrieval system
