Nothobranchius furzeri (turquoise killifish): 107386557
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Entry
107386557 CDS
T05163
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107386557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107386557
03036 Chromosome and associated proteins [BR:
nfu03036
]
107386557
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
107386557
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107386557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
107386557
NCBI-ProteinID:
XP_015816510
UniProt:
A0A1A8AMW3
LinkDB
All DBs
Position
sgr11:complement(17989227..18013517)
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AA seq
1878 aa
AA seq
DB search
MAALSTSTSKLNVLVNRLHEYLAHSNTKDGNETPTSENANGQTNRSRRVGNSMGHTVSET
GVDARYSRRKPLVVIKHSGLDESGDSNASEDLSIPFTSNGHVDVTRLPKGTALVRPEPVD
SGRDDFRGPEFRSRKSNVLQREFSRKRGGGQPVGIVCCTACGRQVNHFRRDSLYQHPVLK
VLICKTCYNYYSSDDISKDGDGMDEQCRWCAEGGNLICCDYCSNAFCKKCILRNLGRKEL
SGILESKWYCYVCSPEPLFDLVMACNAVLENIDNLCSQQRKKNRVEPDKSELYISPLSPQ
NIPLDKWDHSGMDGNVVFNYNTLQVSKGITKKAKHLVDSTNTLNQAFLKFIQNVTNKQKP
RVRMLFLNSFLAVTKGLRKSLTALEESLKEEFSDLDVLGSWDKILSSGLDTVPTDGETEL
DISEERCLRGLQKLASEHVDDNDSDGAAPNAHSGKKLGADSQEARCREQRTSVSQGDVVK
KLVVQLTPVSMEESSSESPKLEDFQKKESKAKGKLLLDEEALAVSPNAESKMSSDLSNAH
LPEEEQGNRRSPRVKTTPLRRQSDVKTKTCLSAADSDSDSDPEGTAGTAPAANDEEQNLS
RERDDSDSDEVPAALLVRANMTQSSDEEEDGHASPSKVAKKCLFWLTKNSPMSPEKMRQK
RKMRDRASESESSCRVISVEQESETDSSSDEQDSQKKIQHLSTVRSIGKPQLVKREEKSG
ARKQRRLQSSNSKAQQEASDSSSLLSEDEQDDDSESDGSVQKMKPITENVSSLGVAAFHQ
SSGDDEQSRPSWAAEDDDPENRIAKKMLLASIKANYSSDDISSGEETPVDESESDDNNEE
KKGTEDAGTNLNGEDEASESSDSTSDKPKSRHHLLRHKLALDEGRSERAESDAEKQESKG
RAKRKRLSSGESGANGCSDSEDEVSEELSQSEVESDEDLQRSKTNKKEEAYGVKPKNEVQ
CIWLSDSSSEKQSEEETVEVDSKSNTPKGRKKIRRIIDDVNLCLESQEALREEEERRKRL
ASREQQMEDRREIIVVEDELSQVSCPITTKLVLDQDEETKTPLVQVHRNLVTRLKPHQVD
GVQFIWDSCCESVKKANSSPGSGCILAHCMGLGKTLQVVAFLHTVLLSSHLKFRTALVVC
PLNTILNWVSEFQKWQDDMEDKVKVTEMATIKSPLERVRALLKWQRDGGVMIMGYEMYRM
MSQGNKTNSEDIRSELRRTLVDPGPDFVVCDEGHILRNESSRISIAMSAIKTQRRVVLTG
TPLQNNLDEYHCMVSFIKKNLLGSLNEFRNRFINPIKNGQCADSTSKDVRIMKKRAHVLH
QMLEGCVQRKDYSELAQFLPPKHEYVLAVRITPLQYKLYRSYLDHISGEGAVTDRPQQRH
GAHFFKDVQVLGRIWNHPWSLQLSKGNKKKNAAGMAAQAINGETIVLESGQRVNEGKAVE
NSSMVAIDAPKDLPVVEGEKLGFSSRPQISDAPWFRNLLTDDEARILEHSGKMVLLFEIL
QIVADLDEKVLVFSQSLTTLDLIEYFLKASHEARKPTSSHKADCWIKNIDYYRLDGSTSA
STRKKWSDEFNNPANARGRLFLISTKAGSLGINLVAANRVVLFDASWNPSYDIQSIYRVY
RFGQLKQVFVYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQQIERHFTLNELNELYSFEP
DLLDDPNSKKSKRPTPILPKDSVLARLLQTCKDQIVSYHEHESLLDHKEEEELSEAERKA
AWAEYEAESNSTSLSSSSNQDSLSGKTNEELMALLNRSRSTVATAFQLLQKMRSASIEEY
KQQLQLQYPLLPEDTLLIKAVTWKQFDDKKRDVTQAFYRDALSQQQSLTLKIQAILNSRR
NFEMQVNQPGDVSRNSVP
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggctgcactaagcacctcgacaagcaagctgaatgttttggtcaacaggctgcacgag
tacttggctcattccaacaccaaagatggcaatgaaacgccaacatcagaaaacgcgaat
ggtcagacaaataggagccgccgtgttgggaactcaatgggtcatactgtctctgagact
ggtgtggacgccagatactcaaggaggaaaccgttggtcgtcataaagcactccggactg
gatgaatctggagactcaaatgcaagcgaggacttgagtataccattcacttcaaatggt
cacgttgatgtcaccagattaccaaaagggacagcgctggtccgacctgaaccagtggac
agtggacgagatgatttcagaggtcctgagtttcgcagtagaaaatccaacgttctgcag
agagagttctcaagaaaacgtggaggagggcaacctgtgggaattgtgtgttgcactgcg
tgtggtcgacaagttaatcacttccggagagattccctttatcaacacccagttctgaaa
gtacttatttgcaagacttgctacaattattactcaagtgatgacatcagcaaggatgga
gatggaatggacgaacagtgccggtggtgtgctgaagggggtaacctcatatgttgcgac
tattgtagcaacgctttctgtaagaaatgcattctgagaaatctgggaaggaaggagctg
tctggcatcttggagagcaagtggtactgctacgtgtgcagtccagagcctctgtttgac
ctggtgatggcttgcaatgccgtcttagaaaatatagacaatctgtgctctcagcagcgt
aagaagaacagagtagagccagacaaatctgaactgtacatatcgccactctcgccacag
aacattcctttggataaatgggaccacagcggtatggatggaaatgtggtcttcaactac
aatacactgcaagtttccaagggcatcaccaaaaaggccaaacatctagtggactcaaca
aacaccttaaatcaagcatttttaaaatttattcagaatgtgacaaacaaacaaaagcct
agagttcgtatgctgtttctgaactcttttttggctgttactaaaggcttacgaaagtct
ctcacagcactggaggagagcctcaaggaagaatttagtgacttggatgtgttaggtagt
tgggacaagatacttagcagtggtcttgatactgttcctacagatggggagactgagctg
gatatttctgaggaaagatgcttgcgtggcttgcagaaactggcatctgagcatgttgac
gataatgactctgatggggcagctccaaacgcccactctgggaagaaattgggtgcagat
tcacaagaagctagatgtagagaacagagaacgtctgtaagtcaaggagatgtggtgaaa
aaacttgtcgtacagcttacacctgtgtccatggaggagtcatcttctgaatccccgaag
ttggaggatttccagaagaaggaaagtaaagcaaagggaaaactgttgttggatgaagaa
gctctcgctgtgagcccgaatgctgaaagtaagatgagcagtgacctgtccaatgctcat
ctcccagaggaggaacaaggcaataggcgatctcctcgtgtgaagacgactcctttgcgc
agacaaagcgatgtcaagaccaaaacgtgtctgtcagcagcagacagtgacagcgactct
gaccccgaaggaacggcgggcactgcacctgccgccaacgatgaagagcaaaatctgagc
agagaaagggacgattctgattcagatgaagtccccgctgcgctgcttgtacgagcaaat
atgactcaaagttcagatgaagaggaagatggtcatgcatcaccgagcaaagtggccaaa
aaatgtctgttttggctcaccaagaatagcccaatgtcgccggagaagatgcggcagaaa
cgtaagatgcgggatcgcgcctcagagtcagaatcgagctgcagagttatcagcgtcgaa
caggaaagcgagacagattcttccagcgatgagcaggactctcagaaaaaaattcagcac
ctaagtacagtgagatcaatagggaagccccagcttgtcaaaagagaagagaaaagtggc
gctagaaagcagagaagactacaatccagcaattccaaagcacagcaggaagcaagtgat
tcatcatctctgctgagtgaagatgagcaagatgatgactctgagagtgatggaagtgtt
cagaagatgaagccgatcacagaaaatgtttcttctttaggagtagcagcattccaccag
tcatcaggagatgatgaacagtccaggccctcatgggcagcagaagatgatgatccggaa
aatagaatcgctaagaaaatgctgttggccagcattaaagccaactactcctcggatgat
atttcttcgggtgaagaaactcctgtggatgaatctgagtcagatgacaacaatgaggag
aaaaaaggcacagaggatgctggaaccaatctaaatggagaagatgaggcatcggagtcc
tctgacagcacgtctgataaaccaaagtccagacaccacctcctccgccacaaacttgcg
ttggatgaggggaggagtgaaagggctgagagtgatgcagaaaagcaggagagcaaagga
agagccaagaggaaacgactgagctctggtgagagtggtgcaaacggctgttccgacagt
gaggatgaggtgagcgaggagttgagccagtctgaagtggaatctgatgaagatctccag
agatcaaagacgaacaaaaaggaggaagcttacggtgtcaaacccaagaatgaagtgcag
tgcatttggctgtctgactccagcagtgaaaagcaaagcgaggaagagaccgtagaggtg
gacagtaaaagcaacacacccaaaggacgcaagaaaattcgtagaattattgacgatgtg
aacctgtgtttggagagccaggaggctctcagagaagaggaggagagacggaagcgtctc
gctagcagagagcagcagatggaggataggagagagataattgtagtggaggatgaactg
tcccaagtgtcatgtcccatcactaccaagctggtcctggatcaggatgaagagaccaag
acaccacttgttcaggtgcacaggaatctggtcacaagactgaagcctcaccaggtggat
ggagtccagtttatttgggacagctgttgtgagtcagtgaagaaggccaactcttctcct
ggatcagggtgtattctggcacactgcatgggtctgggaaagacactgcaggttgtagcg
ttccttcacacggtgctgctctcatcacacctgaagttcagaacagccttggttgtgtgt
ccacttaacaccatcctcaactgggtcagcgagttccagaaatggcaagatgacatggaa
gataaggtcaaggttacagaaatggccacaatcaagtctcctttagaacgagtcagagct
ctgctgaagtggcagagagatggtggtgtcatgatcatggggtacgagatgtaccgcatg
atgtctcaaggtaataaaaccaacagtgaagacatcaggagcgagctgaggagaacgttg
gtggatccaggtccagactttgtggtttgtgacgaagggcacatccttcgcaacgagtcc
tccagaatctctatagctatgagtgcaatcaagacccagagaagagtggtgctgacgggc
acaccgcttcagaacaaccttgatgagtaccactgcatggtcagtttcatcaagaagaat
ctgttgggctctctgaacgagttcagaaaccgcttcattaaccccataaagaacggacag
tgtgcggactccacctcgaaagacgtcaggatcatgaagaagcgagcgcatgtgcttcat
cagatgttggagggatgtgtgcagagaaaagattattcagagttggcccagtttctgcct
cccaaacacgagtatgtgctggcagtgaggatcacccccctccagtataaactgtaccgc
tcctacctcgaccatatctccggtgagggtgcggtgaccgacagaccacagcagaggcac
ggcgcccacttcttcaaggacgttcaggtcctcggtcgcatttggaatcatccctggtcc
cttcagctaagcaaaggaaacaagaagaagaatgcagctggaatggcagctcaggctata
aatggagagaccatcgtgcttgagagcggacagagagtgaacgaggggaaagcggtggag
aacagcagcatggtggctatcgacgctcccaaagacctcccggtggtggaaggagagaaa
ttaggcttcagctcgaggcctcagatttcagatgcgccctggttcagaaacttactgact
gatgatgaagccagaatcctggagcattctgggaagatggttcttttgtttgagatcctc
caaatagtagcagacctggatgaaaaagtgcttgtattcagtcagtctttgaccacgttg
gacctaattgagtacttccttaaggcttctcatgaagccagaaagccaacatcgtcacat
aaagccgactgctggatcaaaaacatagattattaccgcctagacggctccaccagcgct
tcaacaaggaagaaatggtctgatgagttcaataatcccgccaatgcccgtggaagatta
tttctgatctcaacgaaagctggatctcttggcatcaacctggtggctgctaacagggtg
gtcctctttgatgcatcgtggaatccctcgtatgacatccagagcatttacagagtgtat
cgcttcggtcagctcaaacaagtgtttgtgtaccgcttcttggctcagggcaccatggag
gagaagatctatgaccggcaggtgaccaaacagtctctctccttcagagtggtagatcag
cagcagattgagagacacttcactcttaatgagctgaacgaactctactcatttgagcca
gacctgctcgatgacccaaactccaaaaaaagcaagagacccaccccgattctaccaaag
gacagcgtcctggcacgactgctgcaaacttgtaaagaccaaatagtttcgtaccacgaa
cacgaatctctgctggaccataaagaagaggaggagctcagcgaggcagagcgcaaagct
gcgtgggccgagtatgaagctgagtcaaactccaccagcctctccagcagctccaaccag
gactcactgagtgggaagaccaatgaggagctgatggcactgctcaacagaagcagatca
actgtagcaacagccttccagctgctgcagaagatgaggtctgcctctatcgaggaatat
aagcagcaactgcaactgcagtaccccctcttgcctgaggacacgttgctgattaaagct
gtgacttggaaacagtttgatgataagaagcgggacgtcacacaagccttttatcgagac
gctctttctcagcaacaatcactgacgctcaaaatccaggccatactcaacagtcgaaga
aactttgagatgcaagtgaaccagccaggagacgtcagcaggaactctgtgccttaa
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