Nothobranchius furzeri (turquoise killifish): 107389316
Help
Entry
107389316 CDS
T05163
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
107389316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107389316
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107389316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
107389316
NCBI-ProteinID:
XP_015820879
UniProt:
A0A9D3BYX9
LinkDB
All DBs
Position
sgr13:43387766..43397527
Genome browser
AA seq
648 aa
AA seq
DB search
MFKERTEKAKEKLIDPDSSDEESIAPSPPESAQLAGEEKGLKTGGEGAGAGSGAEEDMSG
CCCKVKTPGWVRACMHLRIPASIDPFTNLMYVLWMFLVSLAWNWNVWFIPVRWAFPYQTP
DNLYYWLLIDYLCDLIYILDISVFQPRLQFVQGGDIVCDKKLMRNNYMKTNRFKFDVASL
VPLELFYFKTGINPLLRLPRLLKINSFFEFNERLEAILTKAYIYRVIRTTSYLLYCLHCN
ACLYHWTSAYIGLGSTQWVYNGEGNSYIRCYYFAVKTLITIGGLPHPTTLSEIIFQLINY
FVGVFAFSIMIGQMRDVVGAATAGQTYYRTCMDNTIRYMTSYRIPRDVQYRVKTWYNYTW
QSQGMLDEQELLTQLPDKMRLDIAVDVNYSIVSKVPLFQGCDRQMIFDMLKSLHSVVYLP
GDYVCKKDEVGREMYIIKAGEVQVVGGPDDRTVFATLRAGSVFGEISLLAVGGVNRRTAN
VIAHGFANLFILDKKDLNEILVHYPESMKVLRKKARKMLNKGKKAEPKEEAKEAPRAPAA
PLKPETPKLLRAALEMTERSTGLRGVLAKVKERTNKSSISLQTSVSLSGRPSSPGASSNP
DKEMDTLSSASSTSHRNSERPPPARFHRVTIEKEDVSESEWDEGETRR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagagaggacggagaaggccaaggagaagctgatcgacccggacagctcggat
gaagagagcatcgctccctctcctcctgaatctgcgcagctggctggagaagagaagggc
ctgaaaacaggaggtgaaggagcaggagcagggagcggtgcagaggaggacatgtcagga
tgctgctgtaaggtgaaaactccaggatgggtacgagcctgtatgcacctccgcatccct
gccagcatcgacccgttcaccaacctgatgtacgtgctgtggatgttcctggtgtctctg
gcctggaactggaacgtctggttcatcccagttcgctgggccttcccctaccaaacccca
gataatctttactactggcttctgatcgactacctgtgtgacctcatttacatcctggac
atctccgtcttccagccacgcctgcagtttgtccaagggggagacatagtgtgtgacaaa
aaactaatgagaaataattacatgaaaaccaaccgcttcaagtttgatgtagccagcctt
gttcctttggagctgttttacttcaaaactgggatcaaccctctgcttcgtttaccgaga
ctgttaaagattaactccttctttgagttcaatgagcgtctggaagccatcttgaccaaa
gcctacatttacagggtgatccgtaccacctcttatcttctctactgtcttcactgcaac
gcctgcctctaccactggacctctgcctacatcggactgggatctacccagtgggtctac
aacggtgaagggaacagttacattcgatgttactactttgcggtgaaaacgctgatcacc
atcggaggcctgcctcaccccaccaccctgtctgagatcatcttccagctcatcaactac
tttgttggagtttttgccttctctatcatgattggacagatgcgtgacgttgttggtgcc
gccacggcgggccagacctactaccgcacctgtatggacaacaccatcagatacatgacg
tcctaccgcatcccaagggacgtccagtacagagtcaaaacctggtacaactacacctgg
cagtctcaaggcatgctggatgagcaggaacttctgacccagctgcctgataaaatgcgt
ctggacatcgctgtagatgtcaactactccatcgtgagcaaagtccctctgtttcagggt
tgtgacagacagatgattttcgacatgctgaaaagtctgcattctgtcgtctacctgcct
ggtgattatgtctgcaaaaaggatgaggttggtcgggagatgtacatcataaaagcagga
gaggtgcaggtggttggaggacctgatgataggacagtgttcgccactctcagagcagga
tccgtctttggggagataagtttgctcgcggtgggcggggtaaaccgacgcacggccaat
gtgatcgctcatggatttgcaaatctgttcatcctggacaaaaaagacctgaatgagatc
ttggtccactaccccgagtctatgaaagtcctccgcaagaaggccaggaaaatgttaaac
aagggaaagaaggccgaacccaaagaagaggccaaagaggcgcctcgggctccagcagca
cctctcaagccagagactcccaaactgctcagagcggctctcgaaatgaccgagagatca
accggactcagaggagttctggccaaagtcaaggagagaaccaacaagtcgagcatctcg
ctgcagacatctgtgtccttgtcgggtcgcccctcatctccaggagccagctccaaccct
gacaaagaaatggacacattgtcatcagccagctccacatctcaccgcaactccgaaaga
cctccgcctgcacgctttcaccgtgtcacaatcgagaaggaggacgtcagtgaaagcgag
tgggatgaaggtgaaacgagaaggtga
DBGET
integrated database retrieval system
